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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotationSAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotationSAAS annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotationSAAS annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei403NucleophileUniRule annotation1
Active sitei456Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotationSAAS annotation, Transferase
Biological processCarbohydrate metabolism, Glycogen biosynthesisUniRule annotationSAAS annotation, Glycogen metabolismUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00164

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
ORF Names:KP17_11125Imported
OrganismiPectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)Imported
Taxonomic identifieri555 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesPectobacteriaceaePectobacterium
Proteomesi
  • UP000033091 Componenti: Unassembled WGS sequence

Interactioni

Subunit structurei

Monomer.UniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini245 – 604AamyInterPro annotationAdd BLAST360

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C9C Bacteria
COG0296 LUCA

Family and domain databases

Gene3Di2.60.40.10, 1 hit
2.60.40.1180, 1 hit
HAMAPiMF_00685 GlgB, 1 hit
InterProiView protein in InterPro
IPR006048 A-amylase/branching_C
IPR037439 Branching_enzy
IPR006407 GlgB
IPR006047 Glyco_hydro_13_cat_dom
IPR004193 Glyco_hydro_13_N
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
PANTHERiPTHR43651 PTHR43651, 2 hits
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02806 Alpha-amylase_C, 1 hit
PF02922 CBM_48, 1 hit
PIRSFiPIRSF000463 GlgB, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 2 hits
TIGRFAMsiTIGR01515 branching_enzym, 1 hit

Sequencei

Sequence statusi: Complete.

A0A093SLN7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAFSEAINS LISGHYADPF SLLGMHHSSK GLEVRALLPD AQAVWVVDAS
60 70 80 90 100
NGRKIVELDR VDERGFFCGL VPRRKNAFHY QLAVTWGEET WVIEDPYRFG
110 120 130 140 150
PLLQDMDIWL LAEGTHLRPY ERLGAHLETL DGVEGTRFAV WAPNAQRVSV
160 170 180 190 200
VGQFNFWDGR RHPMRLRQEN GIWELFLPDV KAGQLYKYEM IDSHGSVRLK
210 220 230 240 250
ADPYAFEAQM RPDTASLITP LPEKVPTNDA RREANGLRSP ISIYEVHLGS
260 270 280 290 300
WRRHTDNNFW LSYQELANQL IDYVQYMGFT HVELMPINEH PFDGSWGYQP
310 320 330 340 350
LGLYAPTRRF GTASEFRAFV DALHEADINV LLDWVPGHFP GDEYGLAQFD
360 370 380 390 400
GTALYEYADP REGYHQDWNT LIYNYGRHEV RNYLAGNALF WMERYGIDGL
410 420 430 440 450
RVDAVASMIY RDYSRSEGQW VPNHYGGKEN LEAISFLRYT NHMLGHAAPA
460 470 480 490 500
AITLAEESTD YPGVTLPPDC NGLGFHYKWN MGWMHDTLTY MQLDPVHRKH
510 520 530 540 550
HHDLLTFGML YAYSENFVLP LSHDEVVHGK HSLLDRMPGD VWQKFANLRA
560 570 580 590 600
YYGFMWAYPG KKLLFMGGEF AQGREWNHDA SLDWHLLDEP EGWHRGVQTL
610 620 630 640 650
VRDLNHYYRQ QPSLYQLDFQ PQGFEWLVVD DRENSVFAFI RRDEQGNEVL
660 670 680 690 700
VVSNFTPVPR YGYRIGINQP GGWREAINTD SVHYNGSDSG NVGTIYSEEQ
710 720
ASHQRQHSLV LTIPPLATLY LVKET
Length:725
Mass (Da):83,590
Last modified:November 26, 2014 - v1
Checksum:i95F61BD2371875E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JQHN01000009 Genomic DNA Translation: KFX13834.1
RefSeqiWP_039484749.1, NZ_JQHN01000009.1

Genome annotation databases

EnsemblBacteriaiKFX13834; KFX13834; KP17_11125
PATRICifig|555.20.peg.2148

Similar proteinsi

Entry informationi

Entry nameiA0A093SLN7_PECCC
AccessioniPrimary (citable) accession number: A0A093SLN7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: February 28, 2018
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health