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Protein
Submitted name:

Nuclear pore complex protein Nup50

Gene

N307_00509

Organism
Dryobates pubescens (Downy woodpecker) (Picoides pubescens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear pore complex protein Nup50Imported
Gene namesi
ORF Names:N307_00509Imported
OrganismiDryobates pubescens (Downy woodpecker) (Picoides pubescens)Imported
Taxonomic identifieri118200 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePiciformesPicidaePicoides
Proteomesi
  • UP000053875 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini336 – 467RanBD1InterPro annotationAdd BLAST132

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR015007. NUP2/50/61.
IPR011993. PH-like_dom_sf.
IPR000156. Ran_bind_dom.
PfamiView protein in Pfam
PF08911. NUP50. 1 hit.
PF00638. Ran_BP1. 1 hit.
SMARTiView protein in SMART
SM00160. RanBD. 1 hit.
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiView protein in PROSITE
PS50196. RANBD1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A093HBE2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRIAEKEL TDRNWDQEDE AEEVGTFSVA SEEVLKNRDI KKAKRRNVGS
60 70 80 90 100
ESESGGAFKG FKGFMLPSGK GGSGFSGFGN GAGIKPLEGL SNGSSSVSST
110 120 130 140 150
PPFTSLKTTS ETQSAFGSSM SNGPTATAFA EKKPASPKAN GGNQPSSSGS
160 170 180 190 200
AQSKVCSSSV YHKQLAALNC SVRDWIVKHV NTNPLCDLTP IFRDYEKYLA
210 220 230 240 250
NIEQQHGSGS DSGSESESSK TPGTESVAAF GSSKLQQGST FLFNSNKSGD
260 270 280 290 300
TSEKKPDAAS EKKEPSSGAT SSVSFNFGKP LLHSKSNPNM QRLLTSFSPG
310 320 330 340 350
SSGLFGKDTN QAKSATVVST NVLDAQTEGG NGDEKGEEEE EEPPKVIVNE
360 370 380 390 400
IKEDDAFYSK KCKLFYKKDN EFKEKGVGTL HLKPAGNEKT QLLVRADTNL
410 420 430 440 450
GNILLNVLIP PKMPCTRTGK NNVLIVCVPN PPVDEKNPSV PVTMLIRVKT
460
SEDADELHKI LLEKKEA
Length:467
Mass (Da):49,851
Last modified:November 26, 2014 - v1
Checksum:i944A5DB62BFF34CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL217301 Genomic DNA. Translation: KFV76312.1.
RefSeqiXP_009907387.1. XM_009909085.1.

Genome annotation databases

GeneIDi104307970.

Similar proteinsi

Entry informationi

Entry nameiA0A093HBE2_DRYPU
AccessioniPrimary (citable) accession number: A0A093HBE2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: December 20, 2017
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported