Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

AsnC family transcriptional regulator

Gene

HA72_1956

Organism
Metallosphaera sedula
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi30 – 49H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AsnC family transcriptional regulatorImported
Submitted name:
Transcriptional regulator, AsnC familyImported
Gene namesi
ORF Names:HA72_1956Imported, MsedA_2006Imported, MsedB_2008Imported, MsedC_2006Imported, MsedD_2007Imported, MsedE_2007Imported
OrganismiMetallosphaera sedulaImported
Taxonomic identifieri43687 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeMetallosphaera
Proteomesi
  • UP000062475 Componenti: Chromosome
  • UP000068832 Componenti: Chromosome
  • UP000062398 Componenti: Chromosome
  • UP000029084 Componenti: Chromosome
  • UP000061362 Componenti: Chromosome
  • UP000056255 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 72HTH asnC-typeInterPro annotationAdd BLAST62

Phylogenomic databases

eggNOGiarCOG01580. Archaea.
COG1522. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF01037. AsnC_trans_reg. 1 hit.
PRINTSiPR00033. HTHASNC.
SMARTiView protein in SMART
SM00344. HTH_ASNC. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiView protein in PROSITE
PS50956. HTH_ASNC_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A088E9X7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNGGRKKVE LDTVDRRLLI ELLRDSRVSL RRLSEEMSVS PATLHNRLTR
60 70 80 90 100
LVQEGVIKGF TALVDYTKLG YSLSAIIMVK VNGKYLVEFE KEIANTDNIV
110 120 130 140 150
AVYDVVGEYD VVLIAKFRSV EDLDVFLKQL LKNNKVERTY TSIVLNAVKE

DPRVKI
Length:156
Mass (Da):17,760
Last modified:November 26, 2014 - v1
Checksum:i5864F4CD73B1EAB0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP008822 Genomic DNA. Translation: AIM28080.1.
CP012172 Genomic DNA. Translation: AKV74907.1.
CP012173 Genomic DNA. Translation: AKV77145.1.
CP012174 Genomic DNA. Translation: AKV79395.1.
CP012175 Genomic DNA. Translation: AKV81640.1.
CP012176 Genomic DNA. Translation: AKV83871.1.
RefSeqiWP_012021883.1. NZ_CP012176.1.

Genome annotation databases

EnsemblBacteriaiAIM28080; AIM28080; HA72_1956.
GeneIDi5103343.
PATRICifig|43687.5.peg.2115.

Similar proteinsi

Entry informationi

Entry nameiA0A088E9X7_9CREN
AccessioniPrimary (citable) accession number: A0A088E9X7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 26, 2014
Last sequence update: November 26, 2014
Last modified: October 25, 2017
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported