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Protein
Submitted name:

PHD finger protein 21Ab

Gene
N/A
Organism
Poecilia formosa (Amazon molly) (Limia formosa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AbImported
OrganismiPoecilia formosa (Amazon molly) (Limia formosa)Imported
Taxonomic identifieri48698 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesPoeciliidaePoeciliinaePoecilia
Proteomesi
  • UP000028760 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini466 – 513PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili31 – 58Sequence analysisAdd BLAST28
Coiled coili540 – 578Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00530000063984.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A087Y2X8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMELQTLQEA LKVEIQIHQK LVAQMKQDPQ NADLKKQLHE LQAKITALSE
60 70 80 90 100
KQKKVVEQLR KELLVKQEPE AKLQLQVQTA PVGGDLKPTN LLQSQQIPGG
110 120 130 140 150
LQQCSSNSKQ TLTVTPVLTA KTLLLKAAAT PALPGAILSQ RPPTVAMVTT
160 170 180 190 200
AITKPDSQSV PINLQVASRL TNQSSEPVRL VSKNAVVLQA TTTSSSAQPI
210 220 230 240 250
RVPQFVPPPR LTPRPTFQPQ LLPSPRSAYN ESCTFLLPWP RLATPTKLQR
260 270 280 290 300
PVMLATKLAT SAAPIHQVRI VNGQPCGKTG ATPLTGIVIT TPAPPIQISS
310 320 330 340 350
LISEPKTVKL EAAEQKAAVS LPSSSTPPLS PPPRPKKEEN PEKLAFMVSL
360 370 380 390 400
GLVTHDHLEE IQSKRQERKR RTTANPVYSG AVFEPERKKS AVSYLNSPLH
410 420 430 440 450
QGTRKRGRPP KFSSVPELGS LPAVAHSHTP PSLCCPCGNH EPSLPVIQPY
460 470 480 490 500
KVNRVHDSSS QGDIHEDFCT VCRRSGQLLM CDTCSRVYHL DCLDPPLKTI
510 520 530 540 550
PKGMWICPKC QDQILKKEEA IPWPGTLAIV HSYIAYKEAK EEEKQKLMKW
560 570 580 590 600
SSELKLEREQ LEQRVKQLSN SITKCMETKN TILARQKEMQ LSLDKVKHLI
610
RLIQAFNFNQ AL
Length:612
Mass (Da):67,688
Last modified:November 26, 2014 - v2
Checksum:i5713CAF0E005A514
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AYCK01011931 Genomic DNA. No translation available.
AYCK01011932 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSPFOT00000012398; ENSPFOP00000012381; ENSPFOG00000012323.

Entry informationi

Entry nameiA0A087Y2X8_POEFO
AccessioniPrimary (citable) accession number: A0A087Y2X8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: November 26, 2014
Last modified: August 30, 2017
This is version 18 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported