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Protein
Submitted name:

PR domain-containing protein 11

Gene

PRDM11

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
PR domain-containing protein 11Imported
Gene namesi
Name:PRDM11Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000019485.12.
HGNCiHGNC:13996. PRDM11.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000019485.

PTM / Processingi

Proteomic databases

PaxDbiA0A087WWZ6.
PeptideAtlasiA0A087WWZ6.
PRIDEiA0A087WWZ6.

Expressioni

Gene expression databases

BgeeiENSG00000019485.
ExpressionAtlasiA0A087WWZ6. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliA0A087WWZ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini115 – 226SETInterPro annotationAdd BLAST112

Phylogenomic databases

eggNOGiENOG410IN44. Eukaryota.
ENOG410ZHQ1. LUCA.
GeneTreeiENSGT00830000128341.
OrthoDBiEOG091G05NC.

Family and domain databases

InterProiView protein in InterPro
IPR001214. SET_dom.
PROSITEiView protein in PROSITE
PS50280. SET. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A087WWZ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTENMKECLA QTNAAVGDMV TVVKTEVCSP LRDQEYGQPC SRRPDSSAME
60 70 80 90 100
VEPKKLKGKR DLIVPKSFQQ VDFWFCESCQ EYFVDECPNH GPPVFVSDTP
110 120 130 140 150
VPVGIPDRAA LTIPQGMEVV KDTSGESDVR CVNEVIPKGH IFGPYEGQIS
160 170 180 190 200
TQDKSAGFFS WLIVDKNNRY KSIDGSDETK ANWMRYVVIS REEREQNLLA
210 220 230 240 250
FQHSERIYFR ACRDIRPGEW LRVWYSEDYM KRLHSMSQET IHRNLARGEK
260 270 280 290 300
RLQREKSEQV LDNPEDLRGP IHLSVLRQGK SPYKRGFDEG DVHPQAKKKK
310 320 330 340 350
IDLIFKDVLE ASLESAKVEA HQLALSTSLV IRKVPKYQDD AYSQCATTMT
360 370 380 390 400
HGVQNIGQTQ GEGDWKVPQG VSKEPGQLED EEEEPSSFKA DSPAEASLAS
410 420 430 440 450
DPHELPTTSF CPNCIRLKKK VRELQAELDM LKSGKLPEPP VLPPQVLELP
460 470 480 490 500
EFSDPAASES MVSGPAIMED DDQEVDSADE SVSNDMMTAT DEPSKMSSAT
510 520 530 540 550
GRRIRRFKQE WLKKFWFLRY SPTLNEMWCH VCRQYTVQSS RTSAFIIGSK
560 570 580 590 600
QFKIHTIKLH SQSNLHKKCL QLYKLRMHPE KTEEMCRNMT LLFNTAYHLA
610 620 630 640 650
LEGRPYLDFR PLAELLRKCE LKVVDQYMNE GDCQILIHHI ARALREDLVE
660 670 680 690 700
RIRQSPCLSV ILDGQSDDLL ADTVAVYVQY TSSDGPPATE FLSLQELGFS
710 720 730 740 750
STESYLQALD RAFSALGIRL QDEKPTVGLG VDGANITASL RASMFMTIRK
760 770 780 790 800
TLPWLLCLPF MVHRPHLEIL DAISGKELPC LEELENNLKQ LLSFYRYSPR
810 820 830 840 850
LMCELRSTAA TLCEETEFLG DIRAVRWIIG EQNVLNALIK DYLEVVAHLK
860 870 880 890 900
EVSSQTQRAD ASAIALALLQ FLMDYQSIKL IYFLLDVIAV LSRLAYIFQG
910 920 930 940 950
EYLLVSQVDD KIEEAIQEIS RLADSPGEYL QEFEENFRES FNGIAMKNLR
960 970 980 990 1000
VAEAKFQSIR EKICQKTQVI LAQRFDSRSR IFVKACQVFD LAAWPRSSEE
1010 1020 1030 1040 1050
LMSYGKEDMV QIFDHLEAIP TFSRDVCREG LDPRGSLLME WRELKADYYT
1060 1070 1080 1090 1100
KNGFKDLISH ICKYKQRFPL LNKIIQVLKV LPTSTACCEK GRNALQRVRK
1110 1120 1130 1140 1150
NHRSRLTLEQ LSDLLTIAVN GPPITNFDAK RALDSWFEEK SGNSYALSAE
1160 1170
VLSRMSALEQ KPALQTMDHG TEFYPDI
Length:1,177
Mass (Da):134,261
Last modified:October 29, 2014 - v1
Checksum:iC059AB0B7C68D8C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC103681 Genomic DNA. No translation available.
RefSeqiNP_001243624.1. NM_001256695.1.
XP_011518524.1. XM_011520222.2.
XP_011518525.1. XM_011520223.2.
XP_011518526.1. XM_011520224.2.
XP_011518527.1. XM_011520225.2.
UniGeneiHs.178715.

Genome annotation databases

EnsembliENST00000622142; ENSP00000480626; ENSG00000019485.
GeneIDi56981.
UCSCiuc031qab.1. human.

Similar proteinsi

Entry informationi

Entry nameiA0A087WWZ6_HUMAN
AccessioniPrimary (citable) accession number: A0A087WWZ6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: September 27, 2017
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported