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Protein
Submitted name:

Estrogen receptor beta

Gene

N312_12486

Organism
Balearica regulorum gibbericeps (East African grey crowned-crane)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi171 – 246Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotationImported
Biological processTranscription, Transcription regulationUniRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Estrogen receptor betaImported
Gene namesi
ORF Names:N312_12486Imported
OrganismiBalearica regulorum gibbericeps (East African grey crowned-crane)Imported
Taxonomic identifieri100784 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGruiformesGruidaeBalearica
Proteomesi
  • UP000053309 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 246Nuclear receptorInterPro annotationAdd BLAST76
Domaini289 – 521NR LBDInterPro annotationAdd BLAST233

Sequence similaritiesi

Belongs to the nuclear hormone receptor family. NR3 subfamily.UniRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR028355 ER-beta/gamma
IPR021064 Estrogen_rcpt_beta_N
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR024178 Oest_rcpt/oest-rel_rcp
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF12497 ERbeta_N, 1 hit
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PIRSFiPIRSF500102 ER-b, 1 hit
PIRSF002527 ER-like_NR, 1 hit
PRINTSiPR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 2 hits
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A087VCP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLCASSHKD FSQLLPLQDI GCNKTEIKNS PAGIASPVPY SCNQSVLTVE
60 70 80 90 100
HSPVYIPSSY MESRHEYSAM AFCGPAMMNY NIASNFGDSE SASVRQTSSP
110 120 130 140 150
NVLWSAPDHL SPLALHCQSS LLYAEQPKSP WCEARPLEPV LPVSRETLKR
160 170 180 190 200
KTNVNDCTSP IANNPGSKRD AHFCAVCSDY ASGYHYGVWS CEGCKAFFKR
210 220 230 240 250
SIQGHNDYIC PATNQCTIDK NRRKSCQACR LRKCYEVGMM KCGSRRERCG
260 270 280 290 300
YRILRRHRNS EDQVHCIGKA KKYDETATRV KEILLSTVSP EQFVLTLLEA
310 320 330 340 350
EPPNVLVSRP SKPFTEASMM MSLTKLADKE LVHMIGWAKK IPGFIDLSLY
360 370 380 390 400
DQVRLLESCW MEVLMIGLMW RSIDHPGKLI FAPDLVLDRD EGKCVEGILE
410 420 430 440 450
IFDMLLAMTS RFRELKLQHK EYLCVKAMIL LNSSMFPLSA EEPESNRKLH
460 470 480 490 500
HLLNVVTDAL VWVIAKSGIP SQQQTTRLAN LLMLLSHVRH ASNKGMEHLL
510 520 530 540 550
SMKCKNVVPV YDLLLEMLNA HTLRGQRKSP VTHPEFGPLE QMETGDALRN

GAAQ
Length:554
Mass (Da):62,284
Last modified:October 29, 2014 - v1
Checksum:iEAA21AD44E6F1D46
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KL488399 Genomic DNA Translation: KFO10385.1
RefSeqiXP_010299751.1, XM_010301449.1

Genome annotation databases

GeneIDi104634823

Similar proteinsi

Entry informationi

Entry nameiA0A087VCP3_BALRE
AccessioniPrimary (citable) accession number: A0A087VCP3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: May 23, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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