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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Serratia marcescens
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotationImported
ORF Names:A8A12_12480Imported, AAY84_08395Imported, AR325_24790Imported, AYJ10_19780Imported, B7L73_16755Imported, BGV45_14355Imported, BGV46_14435Imported, ERS381432_02978Imported, ERS381446_03491Imported, ERS381490_00861Imported
OrganismiSerratia marcescensImported
Taxonomic identifieri615 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeSerratia
Proteomesi
  • UP000054899 Componenti: Unassembled WGS sequence
  • UP000034361 Componenti: Unassembled WGS sequence
  • UP000193239 Componenti: Unassembled WGS sequence
  • UP000054922 Componenti: Unassembled WGS sequence
  • UP000179575 Componenti: Unassembled WGS sequence
  • UP000076956 Componenti: Unassembled WGS sequence
  • UP000185968 Componenti: Unassembled WGS sequence
  • UP000179918 Componenti: Unassembled WGS sequence
  • UP000058492 Componenti: Chromosome
  • UP000055043 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A086FF20-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFTAKPET VKRDWYVVDA DGKTLGRLAT ELARRLRGKH KAEYTPHVDT
60 70 80 90 100
GDYIIVLNAD KVAVTGNKRT DKVYYHHTGH IGGIKQATFE EMIARRPERV
110 120 130 140
IEIAVKGMLP KGPLGRAMFR KLKVYAGTEH NHAAQQPQVL DI
Length:142
Mass (Da):16,020
Last modified:October 29, 2014 - v1
Checksum:i58BF5EE9EB75E12F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP013046 Genomic DNA. Translation: ALL40017.1.
FCGE01000004 Genomic DNA. Translation: CUY60432.1.
FCKR01000003 Genomic DNA. Translation: CVE84072.1.
FCLD01000005 Genomic DNA. Translation: CVG38933.1.
LCWI01000005 Genomic DNA. Translation: KKZ18726.1.
LSOB01000007 Genomic DNA. Translation: OAH31915.1.
MJVB01000085 Genomic DNA. Translation: OHT33531.1.
MJVC01000069 Genomic DNA. Translation: OHT34504.1.
LZOB01000019 Genomic DNA. Translation: OKP50353.1.
NBWX01000006 Genomic DNA. Translation: OSB78338.1.
RefSeqiWP_004937079.1. NZ_NDXU01000120.1.

Genome annotation databases

EnsemblBacteriaiALL40017; ALL40017; AR325_24790.
CUY60432; CUY60432; ERS381490_00861.
CVE84072; CVE84072; ERS381432_02978.
CVG38933; CVG38933; ERS381446_03491.
KKZ18726; KKZ18726; AAY84_08395.
OAH31915; OAH31915; AYJ10_19780.
GeneIDi23389972.
PATRICifig|615.101.peg.2243.

Similar proteinsi

Entry informationi

Entry nameiA0A086FF20_SERMA
AccessioniPrimary (citable) accession number: A0A086FF20
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: September 27, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported