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Protein
Submitted name:

BnaA09g34050D protein

Gene

BnaA09g34050D

Organism
Brassica napus (Rape)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
BnaA09g34050D proteinImported
Gene namesi
Name:BnaA09g34050DImported
ORF Names:GSBRNA2T00129527001Imported
OrganismiBrassica napus (Rape)Imported
Taxonomic identifieri3708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica
Proteomesi
  • UP000028999 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini184 – 331YDGInterPro annotationAdd BLAST148
Domaini412 – 470Pre-SETInterPro annotationAdd BLAST59
Domaini473 – 617SETInterPro annotationAdd BLAST145

Phylogenomic databases

KOiK11420.
OMAiVYKYKML.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiView protein in InterPro
IPR025794. Hist-Lys_N-MeTrfase_plant.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
PfamiView protein in Pfam
PF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiView protein in PROSITE
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A078CMV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSHIPMVIP KPEPVTDSSP QTPIPPSSFF NFNTTTTQSP LEPNLYTEFT
60 70 80 90 100
NVAETFRSAF AQRLKRHEDV TVLDSLTGAI VPVPEEQDPD PDPVSYPSQS
110 120 130 140 150
LKPRKPQERS SELVRITDVG PEGERQFREV VRKTRMIYDS LRIFLILEET
160 170 180 190 200
REELGRRRGR PDSKAASMMK ERFLWLNRDK RIVGSIPGVQ VGDIFFFRLE
210 220 230 240 250
LCVMGLHGQT QAGIDYLIGS RSSNGEPIAT SVIVSGGYED DDDQGDVIIY
260 270 280 290 300
TGHGGQDKLG RQAEHQKLEG GNLAMERSMY YGIEVRVVRG FKYENAVSSK
310 320 330 340 350
VYVYDGLFRI VDSWFDVGKS GFGVFKFRLE RIGGQVEMGT SVLKFAKTLK
360 370 380 390 400
TNPLSVRPSG YISFDISNRK ENAPVYLFND VDDDQEPLYY EYLATTSFPR
410 420 430 440 450
GILGGSNGDN ASGCECVSGC SSGCICERKN GGEFAYDYNG NLIRMRPLVH
460 470 480 490 500
ECGPGCKCPP TCRNRVTQKG LRSRLEVFRS VETGWGVRCL DILHAGAFIC
510 520 530 540 550
EYVGVALTRE QANILTMNGD TLVYPARFCS DRWKDWGDLS QVFPDYERPS
560 570 580 590 600
YPQIPPVDYA MDVSKLRNVA CYISHSNDSN VIVQLVLHDH NNLMFPRVML
610 620 630
FAAENIPPMT ELSLDYGVSD DEWSPKLAIC N
Length:631
Mass (Da):70,835
Last modified:October 29, 2014 - v1
Checksum:i1CACC4D42B1A8122
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LK031814 Genomic DNA. Translation: CDX78210.1.
RefSeqiXP_013710992.1. XM_013855538.1.

Genome annotation databases

EnsemblPlantsiCDX78210; CDX78210; GSBRNA2T00129527001.
GeneIDi106414948.
GrameneiCDX78210; CDX78210; GSBRNA2T00129527001.
KEGGibna:106414948.

Similar proteinsi

Entry informationi

Entry nameiA0A078CMV5_BRANA
AccessioniPrimary (citable) accession number: A0A078CMV5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 29, 2014
Last sequence update: October 29, 2014
Last modified: June 7, 2017
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported