Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

HMPREF1002_04509

Organism
Porphyromonas sp. 31_2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi446 – 467H-T-H motifPROSITE-ProRule annotationAdd BLAST22
DNA bindingi495 – 518H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:HMPREF1002_04509Imported
OrganismiPorphyromonas sp. 31_2Imported
Taxonomic identifieri658663 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaePorphyromonas
Proteomesi
  • UP000027795 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei345 – 368HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini426 – 528HTH araC/xylS-typeInterPro annotationAdd BLAST103

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR011990. TPR-like_helical_dom_sf.
PfamiView protein in Pfam
PF12833. HTH_18. 1 hit.
SMARTiView protein in SMART
SM00342. HTH_ARAC. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48452. SSF48452. 1 hit.
PROSITEiView protein in PROSITE
PS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A073IA95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTSILYIFL LSVLYACDSH SLLPPKQQLD QQIAQLNDYS LLSGPLNDQL
60 70 80 90 100
CEEIETHAQE IGNDSLLLAT RQIIYTRYCR LQDTAHARML LDRMKPYAIR
110 120 130 140 150
IKDKHLLMNH LRMAFLHAQI RQPAECERWI NEARKYAYIN PQNWYITAAS
160 170 180 190 200
ACLECGLYPQ ALIYADSALV NLKYKVISSP HLVKAIALSR TGKTAEAEEW
210 220 230 240 250
TQRCITDIRH FQAKHQIHTI SYLQYQLFME YAVSLRKHGK NKEALSVLEE
260 270 280 290 300
LDRVSFNNVA TPLLRNKDNI EEYKVRVARM LSECHYATGN QSEAIQQANR
310 320 330 340 350
ADSLQSHYAQ EQMNIRRKMI SESLQNELLS TRLKSQKAEA EQARLIQYIL
360 370 380 390 400
TGVIILLMAI LTGGYLWWRN HRRRLRQLFD LLISHHAAWL LIHDPLPLIS
410 420 430 440 450
RPQIKLPDHS EANTEVTTKA DNLLYQRILS VMKEQKPFLN PNLDLVTLSR
460 470 480 490 500
LVGTNRTQLS TTLNRQTGMN FSRWLAEYRV HHLLSLVALR PDSDITALAS
510 520 530
ESGFTSRTSF FRQFRQVTGL TPNQYRNVRK ETGK
Length:534
Mass (Da):61,852
Last modified:October 1, 2014 - v1
Checksum:i95BB3E40185B699C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACUD01000002 Genomic DNA. Translation: KEJ86639.1.

Genome annotation databases

EnsemblBacteriaiKEJ86639; KEJ86639; HMPREF1002_04509.
PATRICifig|658663.3.peg.857.

Similar proteinsi

Entry informationi

Entry nameiA0A073IA95_9PORP
AccessioniPrimary (citable) accession number: A0A073IA95
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2014
Last sequence update: October 1, 2014
Last modified: November 22, 2017
This is version 20 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported