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Protein

DNA-directed RNA polymerase subunit

Gene

RPB1-1

Organism
Wolfiporia cocos
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseUniRule annotation, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunitUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:RPB1-1Imported
OrganismiWolfiporia cocosImported
Taxonomic identifieri81056 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesPolyporalesWolfiporia

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini243 – 546RPOLA_NInterPro annotationAdd BLAST304

Sequence similaritiesi

Belongs to the RNA polymerase beta' chain family.UniRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR000722. RNA_pol_asu.
IPR000684. RNA_pol_II_repeat_euk.
IPR006592. RNA_pol_N.
IPR007080. RNA_pol_Rpb1_1.
IPR007066. RNA_pol_Rpb1_3.
IPR007083. RNA_pol_Rpb1_4.
IPR007081. RNA_pol_Rpb1_5.
IPR007075. RNA_pol_Rpb1_6.
IPR007073. RNA_pol_Rpb1_7.
PfamiView protein in Pfam
PF04997. RNA_pol_Rpb1_1. 1 hit.
PF00623. RNA_pol_Rpb1_2. 1 hit.
PF04983. RNA_pol_Rpb1_3. 1 hit.
PF05000. RNA_pol_Rpb1_4. 1 hit.
PF04998. RNA_pol_Rpb1_5. 1 hit.
PF04992. RNA_pol_Rpb1_6. 1 hit.
PF04990. RNA_pol_Rpb1_7. 1 hit.
SMARTiView protein in SMART
SM00663. RPOLA_N. 1 hit.
PROSITEiView protein in PROSITE
PS00115. RNA_POL_II_REPEAT. 2 hits.

Sequencei

Sequence statusi: Complete.

A0A068L9D5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGHQFAYSA APVRKVKEVQ FGILSPEEVK AYSVAKIEHP EVMDETTHKP
60 70 80 90 100
KLGGLMDPRM GTIDRNFKCQ TCGEGMSECP GHFGHIELAR PVFHPGFIVK
110 120 130 140 150
VKKILECICV NCGRLKVNSS DVAFADKIKH VRDPKARMQT VWQNCKGKMN
160 170 180 190 200
CEADEPKDEG DHLESEEPKK GHGGCGATQP LIRKEGLKLF VQYKRSKDED
210 220 230 240 250
EEVKSLQPDK RLFPPHEVYT ALKKISDADL HMLGLSDEYA RPEWMILTVM
260 270 280 290 300
PVPPPPVRPS IAVDGGAMRS EDDLTYKLGD IIKASANVRR CEQEGAPAHV
310 320 330 340 350
ITEFEQLLQF HVATYMDNDI AGIPQALQKS GRPVKAIRAR LKGKEGRLRG
360 370 380 390 400
NLMGKRVDFS ARTVITGDPN LELDEVGVPR SIAMNLTFPE RVTPYNIAYL
410 420 430 440 450
QELVRNGPTA YPGARYVVRD TGERIDLRYN KRADAFLQYG WIVERHLKDG
460 470 480 490 500
DFVLFNRQPS LHKMSMMSHR VKLMPYSTFR LNLSVTPPYN ADFDGDEMNM
510 520 530 540 550
HVPQSEETRA ELSQIAWVPR QIISPQANKP VMGIVQDTLC GIRKFTLRDT
560 570 580 590 600
FLDWSQVQNI LLWVPDWDGS VPIPAIIKPK PLWTGKQILS MCIPRGINIH
610 620 630 640 650
RSPDPKSPNP VFDDGMNIEN GEIIFGIVEK KTVGASQGGL VHIVFREKGP
660 670 680 690 700
EATRTLFTGL QQVVNYWLFH NGFSIGIGDT IADRKTMESI QQQIAMHREN
710 720 730 740 750
VAKVIEDATH DRLKAAPGMT IRESFESQVE RELNLARDRS GQYAQKNLKE
760 770 780 790 800
DNNVKQMVVA GSKGSFINIS QMSVCVGQQI VEGRRIPFGF RHRTLPHFTK
810 820 830 840 850
DDFSPEARGF VENSYLRGLT PQEFFFHAMA GREGLIDTAV KTAETGYIQR
860 870 880 890 900
RLVKALEDVM VCYDGTVRNS LGDLVQFVYG EDGMDGAFIE RQNIETFALN
910 920 930 940 950
NREFEHNYRV DVTDPSGGFL PGVLQVGLDD SSLDLQSKLD EEYAQLVEDR
960 970 980 990 1000
RLLREFIFRR QDPSIPHYLP VNLQRIVQNA IQIFHIDRRK PSDLEPAYII
1010 1020 1030 1040 1050
DSVRDLASRL LVVRGNTRFS REAQENATLM FRMHLRATFA ARRVLEKYHL
1060 1070 1080 1090 1100
NREAFEWVLG EVEAKFNQSL AHPGEMCGTL AAQSIGEPAT QMTLNTFHYA
1110 1120 1130 1140 1150
GVSSKNVTLG VPRLKEIINV ATNIKTPSLS VYLTPEIAKD KILANGVQQE
1160 1170 1180 1190 1200
LAYTSLRTVT AAVEIWYDPD PTTTIIEEDS VFVESFFAIP DEEVEQKLHL
1210 1220 1230 1240 1250
QSPWLLRLEL DRAKMIDRKL TMSYVAGRIA ESFKTDLFVI WSEDNSEKLI
1260 1270 1280 1290 1300
IRCRVLGGAD KDEDGMETVE EDIFLRQLEN TMLNSISLRG VPGIQRVFLL
1310 1320 1330 1340 1350
EHDKVVITEE GSIKTRQEKE WVLETDGVNL KTVMCIDGVD FKRTYSNSCV
1360 1370 1380 1390 1400
EIFNVLGIEA ARAAIMKELR GVIEFDGSYV NYRHLALLCD LMTHRGSLMA
1410 1420 1430 1440 1450
ITRHGINRAD TGALMRSSFE ETVEILMEAA AVGERDDCHG IAENVIFGQM
1460 1470 1480 1490 1500
APMGTGAFDV ALDIDMLKDV IVDHRLPVQS MLAAQVDGGI TPGQVAMTPY
1510 1520 1530 1540 1550
DTNSPMWTQD ASFKGEPAAF TPLAVNGGED PASFSYLGFG QSPMGAGGMS
1560 1570 1580 1590 1600
PAAPGYSPSS PNVYSPTSPY VPPSPFGGAT SPFGTSPYAT SPFYDRTRGP
1610 1620 1630 1640 1650
TSPTYSPTSP ALNLTSPGYS PTSPRYSPTS PSFSPTSPRY SPQSPSFSPT
1660 1670 1680 1690 1700
SPRYSPTSPS FSPASPRFFP LPFTLYSFSR TDVAVVAQIL TNFANFANFA
1710 1720 1730
EVFSYIAYLL TSLSRILSCF SGIQSDIATV VTL
Length:1,733
Mass (Da):193,519
Last modified:October 1, 2014 - v1
Checksum:i99F432F697A3166B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KJ716547 mRNA. Translation: AIE40065.1.

Similar proteinsi

Entry informationi

Entry nameiA0A068L9D5_9APHY
AccessioniPrimary (citable) accession number: A0A068L9D5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2014
Last sequence update: October 1, 2014
Last modified: April 12, 2017
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)