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Protein
Submitted name:

C-type cytochrome biogenesis protein CcmF

Gene

ccmF

Organism
Escherichia coli
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type cytochrome biogenesis protein CcmFImported
Submitted name:
Cytochrome C biogenesis protein CcmFImported
Submitted name:
Cytochrome c heme lyase subunit CcmFImported
Submitted name:
Cytochrome c-type biogenesis protein CcmFImported
Submitted name:
Heme lyase, CcmF subunitImported
Gene namesi
Name:ccmFImported
Synonyms:ccmF_2Imported
ORF Names:ACN77_21425Imported, ACU57_17340Imported, ACU90_06635Imported, AKN40_1630Imported, AM266_05730Imported, AM341_21870Imported, AUQ13_05230Imported, AWE18_04220Imported, BK334_03005Imported, BMR18_10525Imported, BMR26_22255Imported, BMT91_23975Imported, BUE81_18320Imported, BVL39_16370Imported, BW690_25680Imported, CA593_16225Imported, CDL37_03135Imported, CES94_18065Imported, CGZ52_09060Imported, CJU64_13320Imported, CR534_08235Imported, CRM83_01710Imported, CSB64_18100Imported, CSB65_06330Imported, CU078_24785Imported, EC1094V2_1486Imported, EC3234A_43c00170Imported, ECONIH1_12855Imported, EL75_1437Imported, EL79_1446Imported, EL80_1468Imported, MS6198_25260Imported, PGD_01028Imported, SK85_02445Imported, WR15_09345Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000230908 Componenti: Chromosome
  • UP000225895 Componenti: Unassembled WGS sequence
  • UP000197584 Componenti: Chromosome
  • UP000030018 Componenti: Unassembled WGS sequence
  • UP000030000 Componenti: Unassembled WGS sequence
  • UP000203621 Componenti: Chromosome
  • UP000217317 Componenti: Chromosome
  • UP000030317 Componenti: Chromosome
  • UP000188724 Componenti: Unassembled WGS sequence
  • UP000233539 Componenti: Unassembled WGS sequence
  • UP000224973 Componenti: Unassembled WGS sequence
  • UP000070045 Componenti: Unassembled WGS sequence
  • UP000234324 Componenti: Chromosome
  • UP000050307 Componenti: Unassembled WGS sequence
  • UP000214591 Componenti: Unassembled WGS sequence
  • UP000037564 Componenti: Unassembled WGS sequence
  • UP000184459 Componenti: Unassembled WGS sequence
  • UP000094504 Componenti: Chromosome
  • UP000234906 Componenti: Chromosome
  • UP000225370 Componenti: Unassembled WGS sequence
  • UP000036012 Componenti: Unassembled WGS sequence
  • UP000222984 Componenti: Unassembled WGS sequence
  • UP000051850 Componenti: Unassembled WGS sequence
  • UP000230960 Componenti: Chromosome
  • UP000229954 Componenti: Unassembled WGS sequence
  • UP000186204 Componenti: Unassembled WGS sequence
  • UP000220282 Componenti: Unassembled WGS sequence
  • UP000186169 Componenti: Unassembled WGS sequence
  • UP000050556 Componenti: Unassembled WGS sequence
  • UP000188855 Componenti: Unassembled WGS sequence
  • UP000233768 Componenti: Chromosome iv
  • UP000029988 Componenti: Unassembled WGS sequence
  • UP000077380 Componenti: Unassembled WGS sequence
  • UP000194199 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 29HelicalSequence analysisAdd BLAST24
Transmembranei41 – 62HelicalSequence analysisAdd BLAST22
Transmembranei96 – 114HelicalSequence analysisAdd BLAST19
Transmembranei121 – 142HelicalSequence analysisAdd BLAST22
Transmembranei178 – 198HelicalSequence analysisAdd BLAST21
Transmembranei210 – 230HelicalSequence analysisAdd BLAST21
Transmembranei250 – 267HelicalSequence analysisAdd BLAST18
Transmembranei274 – 294HelicalSequence analysisAdd BLAST21
Transmembranei314 – 332HelicalSequence analysisAdd BLAST19
Transmembranei353 – 374HelicalSequence analysisAdd BLAST22
Transmembranei394 – 412HelicalSequence analysisAdd BLAST19
Transmembranei424 – 444HelicalSequence analysisAdd BLAST21
Transmembranei450 – 472HelicalSequence analysisAdd BLAST23
Transmembranei484 – 503HelicalSequence analysisAdd BLAST20
Transmembranei609 – 629HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini89 – 296Cytochrom_C_asmInterPro annotationAdd BLAST208
Domaini316 – 630CcmF_CInterPro annotationAdd BLAST315

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105DA4. Bacteria.
COG1138. LUCA.
OMAiLILGGWT.

Family and domain databases

InterProiView protein in InterPro
IPR032523. CcmF_C.
IPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
IPR003568. Cyt_c_biogenesis_CcmF.
PfamiView protein in Pfam
PF16327. CcmF_C. 1 hit.
PF01578. Cytochrom_C_asm. 1 hit.
PRINTSiPR01410. CCBIOGENESIS.
PR01411. CCMFBIOGNSIS.
TIGRFAMsiTIGR00353. nrfE. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A037Y7B1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPEIGNGLL CLALGIALLL SVYPLWGVAR GDARMMASSR LFAWLLFMSV
60 70 80 90 100
AGAFLVLVNA FVVNDFTVTY VASNSNTQLP VWYRVAATWG AHEGSLLLWV
110 120 130 140 150
LLMSGWTFAV AIFSQRIPLD IVARVLAIMG MVSVGFLLFI LFTSNPFSRT
160 170 180 190 200
LPNFPIEGRD LNPLLQDPGL IFHPPLLYMG YVGFSVAFAF AIASLLSGRL
210 220 230 240 250
DSTYARFTRP WTLAAWIFLT LGIVLGSAWA YYELGWGGWW FWDPVENASF
260 270 280 290 300
MPWLVGTALM HSLAVTEQRA SFKAWTLLLA ISAFSLCLLG TFLVRSGVLV
310 320 330 340 350
SVHAFASDPA RGMFILAFMV LVIGGSLLLF AARGHKVRSR VNNALWSRES
360 370 380 390 400
LLLANNVLLV AAMLVVLLGT LLPLVHKQLG LGSISIGEPF FNTMFTWLMV
410 420 430 440 450
PFALLLGVGP LVRWGRDRPR KIRNLLIIAF ISTLVLSLLL PWLFESKVVA
460 470 480 490 500
MTVLGLAMAC WIAVLAIAEA ALRISRGTKT TFSYWGMVAA HLGLAVTIVG
510 520 530 540 550
IAFSQNYSVE RDVRMKSGDS VDIHEYRFTF RDVKEVTGPN WRGGVATIGV
560 570 580 590 600
TRDGKPETVL YAEKRYYNTA GSMMTEAAID GGITRDLYAA LGEELENGAW
610 620 630 640
AVRLYYKPFV RWIWAGGLMM ALGGLLCLFD PRYRKRVSPQ KTAPEAV
Length:647
Mass (Da):71,389
Last modified:July 9, 2014 - v1
Checksum:i162316A1ED156DA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009859 Genomic DNA. Translation: AIX64071.1.
CP015834 Genomic DNA. Translation: AOM70627.1.
CP021175 Genomic DNA. Translation: ARR34538.1.
CP022154 Genomic DNA. Translation: ASG50615.1.
CP012378 Genomic DNA. Translation: ASO78435.1.
CP023346 Genomic DNA. Translation: ATB09077.1.
CP024821 Genomic DNA. Translation: ATX11655.1.
CP024859 Genomic DNA. Translation: ATX54186.1.
CP024127 Genomic DNA. Translation: AUK21150.1.
CP019051 Genomic DNA. Translation: AUL69589.1.
HG976952 Genomic DNA. Translation: CDU37957.1.
JPKH01000010 Genomic DNA. Translation: KGM70484.1.
JPKL01000028 Genomic DNA. Translation: KGM82086.1.
JPMZ01000010 Genomic DNA. Translation: KGM83795.1.
LEUM01000015 Genomic DNA. Translation: KLX96759.1.
LGZN01000022 Genomic DNA. Translation: KNF70214.1.
LDYI01000116 Genomic DNA. Translation: KPO09528.1.
LECN01000042 Genomic DNA. Translation: KPO56649.1.
LIVE01000007 Genomic DNA. Translation: KQJ17515.1.
LOOZ01000009 Genomic DNA. Translation: KXR92884.1.
LCVH01000043 Genomic DNA. Translation: OAC43604.1.
MOIL01000006 Genomic DNA. Translation: OJP15757.1.
LGMU01000129 Genomic DNA. Translation: OKU08830.1.
MSEK01000129 Genomic DNA. Translation: OLR85948.1.
MTKH01000271 Genomic DNA. Translation: ONG23778.1.
MPAF01000075 Genomic DNA. Translation: OOK24274.1.
NIIS01000002 Genomic DNA. Translation: OXK53859.1.
PCGF01000028 Genomic DNA. Translation: PDO60193.1.
PDEE01000004 Genomic DNA. Translation: PEH96885.1.
MPHW01000022 Genomic DNA. Translation: PGF66964.1.
MPIE01000048 Genomic DNA. Translation: PGF94409.1.
PEDR01000011 Genomic DNA. Translation: PHW97080.1.
PEDQ01000037 Genomic DNA. Translation: PHX00036.1.
NMUP01000018 Genomic DNA. Translation: PKR63807.1.
LT883142 Genomic DNA. Translation: SMZ44582.1.
RefSeqiWP_000982447.1. NZ_PJIY01000037.1.

Genome annotation databases

EnsemblBacteriaiAIX64071; AIX64071; ECONIH1_12855.
ANP18926; ANP18926; GJ12_14575.
AOM70627; AOM70627; MS6198_25260.
AOT32142; AOT32142; FORC31_1679.
CDU37957; CDU37957; PGD_01028.
CTX61709; CTX61709; ERS139266_00388.
KGM70484; KGM70484; EL75_1437.
KGM82086; KGM82086; EL80_1468.
KGM83795; KGM83795; EL79_1446.
KHH08704; KHH08704; PU69_12435.
KIG80777; KIG80777; PU38_12665.
KIH37677; KIH37677; PD07_03230.
KLX96759; KLX96759; SK85_02445.
KNF70214; KNF70214; WR15_09345.
KPO09528; KPO09528; ACU57_17340.
KPO56649; KPO56649; ACU90_06635.
KQJ17515; KQJ17515; AM266_05730.
KXQ37488; KXQ37488; AUQ01_20175.
OAC43604; OAC43604; EC3234A_43c00170.
PATRICifig|562.10476.peg.209.

Similar proteinsi

Entry informationi

Entry nameiA0A037Y7B1_ECOLX
AccessioniPrimary (citable) accession number: A0A037Y7B1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: March 28, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported