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Protein
Submitted name:

Transcriptional regulator

Gene

BY96_07235

Organism
Escherichia coli O111:NM str. K6722
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi38 – 57H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
ORF Names:BY96_07235Imported
OrganismiEscherichia coli O111:NM str. K6722Imported
Taxonomic identifieri1446533 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000024307 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliA0A027U0W5.
SMRiA0A027U0W5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 78HTH gntR-typeInterPro annotationAdd BLAST69

Phylogenomic databases

OMAiNRHTVRS.

Family and domain databases

CDDicd07377. WHTH_GntR. 1 hit.
Gene3Di1.10.10.10. 1 hit.
3.40.1410.10. 1 hit.
InterProiView protein in InterPro
IPR028978. Chorismate_lyase_/UTRA_dom_sf.
IPR000524. Tscrpt_reg_HTH_GntR.
IPR011663. UTRA.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00392. GntR. 1 hit.
PF07702. UTRA. 1 hit.
PRINTSiPR00035. HTHGNTR.
SMARTiView protein in SMART
SM00345. HTH_GNTR. 1 hit.
SM00866. UTRA. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF64288. SSF64288. 1 hit.
PROSITEiView protein in PROSITE
PS50949. HTH_GNTR. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A027U0W5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSATDRYSHQ LLYATVRQRL LDDIAQGVYQ AGQQIPTENE LCTQYNVSRI
60 70 80 90 100
TIRKAISDLV ADGVLIRWQG KGTFVQSQKV ENALLTVSGF TDFGVSQGKA
110 120 130 140 150
TKEKVIEQER VSAAPFCEKL NIPGNSEVFH LCRVMYLDKE PLFIDSSWIP
160 170 180 190 200
LSRYPDFDEI YVEGSSTYQL FQERFDTRVV SDKKTIDIFA ATRPQAKWLK
210 220 230 240
CELGEPLFRI SKIAFDQNDK PVHVSELFCR ANRITLTIDN KRH
Length:243
Mass (Da):27,821
Last modified:July 9, 2014 - v1
Checksum:i973FEE8232B9B0F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JHHU01000020 Genomic DNA. Translation: EZD31170.1.
RefSeqiWP_001276847.1. NZ_JHHU01000020.1.

Genome annotation databases

EnsemblBacteriaiEZD31170; EZD31170; BY96_07235.

Similar proteinsi

Entry informationi

Entry nameiA0A027U0W5_ECOLX
AccessioniPrimary (citable) accession number: A0A027U0W5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: March 28, 2018
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported