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Protein
Submitted name:

C-di-GMP phosphodiesterase

Gene

BY96_23160

Organism
Escherichia coli O111:NM str. K6722
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
C-di-GMP phosphodiesteraseImported
Gene namesi
ORF Names:BY96_23160Imported
OrganismiEscherichia coli O111:NM str. K6722Imported
Taxonomic identifieri1446533 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000024307 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliA0A027TH73.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 64PASInterPro annotationAdd BLAST48
Domaini134 – 178PASInterPro annotationAdd BLAST45
Domaini208 – 260PACInterPro annotationAdd BLAST53
Domaini402 – 532GGDEFInterPro annotationAdd BLAST131
Domaini541 – 795EALInterPro annotationAdd BLAST255

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili457 – 477Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
cd00130. PAS. 2 hits.
Gene3Di3.20.20.450. 1 hit.
InterProiView protein in InterPro
IPR012226. Diguanyl_cyclase/Pdiesterase.
IPR001633. EAL_dom.
IPR035919. EAL_sf.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR035965. PAS-like_dom_sf.
PfamiView protein in Pfam
PF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF13426. PAS_9. 2 hits.
PIRSFiPIRSF005925. Dos. 3 hits.
SMARTiView protein in SMART
SM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 2 hits.
SM00091. PAS. 2 hits.
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiView protein in PROSITE
PS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 2 hits.

Sequencei

Sequence statusi: Complete.

A0A027TH73-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLTDADNAA DGIFFPALEQ NMMGAVLINE NDEVMFFNPA AEKLWGYKRE
60 70 80 90 100
EVIGNNIDML IPRDLRPAHP EYIRHNREGG KARVEGMSRE LQLEKKDGSK
110 120 130 140 150
IWTRFALSKV SAEGKVYYLA LVRDASVEMA QKEQTRQLII AVDHLDRPVI
160 170 180 190 200
VLDPERHIVQ CNRAFTEMFG YCISEASGMQ PDTLLNIPEF PADNRIRLQQ
210 220 230 240 250
LLWKTARDQD EFLLLTRTGE KIWIKASISP VYDVLAHLQN LVMTFSDITE
260 270 280 290 300
ERQIRQLEGN ILAAMCSSPP FHEMGEIICR NIESVLNESH VSLFALRNGM
310 320 330 340 350
PIHWASSSHG AEVQNAQSWS ATIRQRDGAP AGILQIKTSS GAETSAFIER
360 370 380 390 400
VADISQHMAA LALEQEKSRQ HIEQLIQFDP MTGLPNRKNL HNYLDDLVDK
410 420 430 440 450
AVSPVVYLIG VDHIQDVIDS LGYAWADQAL LEVVNRFREK LKPDQYLCRI
460 470 480 490 500
EGTQFVLVSL ENDVSNITQI ADELRNVVSK PIMIDDKPFP LTLSIGISYD
510 520 530 540 550
VGKNRDYLLS TAHNAMDYIR KNGGNGWQFF SPAMNEMVKE RLVLGAALKE
560 570 580 590 600
AISNNQLKLV YQPQIFAETG ELYGIEALAR WHDPQHGHVP PSRFIPLAEE
610 620 630 640 650
IGEIENIGRW VIAEACRQLA EWRSQNIHIP ALSVNLSALH FRSNQLPNQV
660 670 680 690 700
SDAMQAWGID GHQLTVEITE SMMMEHDTEI FKRIQILRDM GVGLSVDDFG
710 720 730 740 750
TGFSGLSRLV SLPVTEIKID KSFVDRCLTE KRILALLEAI TSIGQSLNLT
760 770 780 790
VVAEGVEIKE QFEMLRKIHC RVIQGYFFSR PLPAEEIPGW MSSVLPLKI
Length:799
Mass (Da):90,264
Last modified:July 9, 2014 - v1
Checksum:i7FC5431F53C003E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JHHU01000070 Genomic DNA. Translation: EZD24559.1.
RefSeqiWP_001425964.1. NZ_JHHU01000070.1.

Genome annotation databases

EnsemblBacteriaiEZD24559; EZD24559; BY96_23160.

Similar proteinsi

Entry informationi

Entry nameiA0A027TH73_ECOLX
AccessioniPrimary (citable) accession number: A0A027TH73
Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: December 20, 2017
This is version 21 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported