Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Bacterial regulatory s, tetR family protein

Gene

J504_3586

Organism
Acinetobacter baumannii 348935
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Bacterial regulatory s, tetR family proteinImported
Gene namesi
ORF Names:J504_3586Imported
OrganismiAcinetobacter baumannii 348935Imported
Taxonomic identifieri1310605 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaeAcinetobacterAcinetobacter calcoaceticus/baumannii complex
Proteomesi
  • UP000020680 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 25HTH tetR-type DNA-bindingInterPro annotationAdd BLAST24
Domaini47 – 156Tet_transcr_reg_TetR-rel_CInterPro annotationAdd BLAST110

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF16925. TetR_C_13. 1 hit.
PF00440. TetR_N. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A009DXM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSVQVPKGS FYHYFVNKEA FILEVLDAYE LYFVKRLNKF LSQTDLSPLE
60 70 80 90 100
KLQNFVKDAG EKMQKYDFKR GCILGNLGQE VSYLPQEIIA RIESIFKVWE
110 120 130 140 150
NLVSDCLHQS NSQYSLADCD EAAYQFWIGW EGAVLRARLV KSTSPLDAFY
160
RLFTLAVKQQ NHVKS
Length:165
Mass (Da):19,164
Last modified:June 11, 2014 - v1
Checksum:i8353A43BEACB2857
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JEVW01000324 Genomic DNA. Translation: EXA55241.1.

Genome annotation databases

EnsemblBacteriaiEXA55241; EXA55241; J504_3586.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JEVW01000324 Genomic DNA. Translation: EXA55241.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEXA55241; EXA55241; J504_3586.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF16925. TetR_C_13. 1 hit.
PF00440. TetR_N. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA0A009DXM2_ACIBA
AccessioniPrimary (citable) accession number: A0A009DXM2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 11, 2014
Last sequence update: June 11, 2014
Last modified: March 15, 2017
This is version 16 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.