Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)  Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Archaeoglobus Reference proteome set (2,398) |
| Cenarchaeum symbiosum (strain A) Archaea › Thaumarchaeota › Cenarchaeales › Cenarchaeaceae › Cenarchaeum Reference proteome set (2,022) |
| Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium) Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halobacterium Reference proteome set (2,426) |
| Hyperthermus butylicus (strain DSM 5456 / JCM 9403) Archaea › Crenarchaeota › Thermoprotei › Desulfurococcales › Pyrodictiaceae › Hyperthermus Reference proteome set (1,602) |
| Korarchaeum cryptofilum (strain OPF8) Archaea › Korarchaeota › Candidatus Korarchaeum Reference proteome set (1,602) |
| Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus Reference proteome set (1,787) |
| Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) Archaea › Euryarchaeota › Methanopyri › Methanopyrales › Methanopyraceae › Methanopyrus Reference proteome set (1,687) |
| Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanosarcina Reference proteome set (4,468) |
| Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) Archaea › Euryarchaeota › Methanomicrobia › Methanomicrobiales › Methanospirillaceae › Methanospirillum Reference proteome set (3,087) |
| Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum) Archaea › Euryarchaeota › Methanobacteria › Methanobacteriales › Methanobacteriaceae › Methanothermobacter Reference proteome set (1,869) |
| Nanoarchaeum equitans (strain Kin4-M) Archaea › Nanoarchaeota › Nanoarchaeum Reference proteome set (536) |
| Nitrosopumilus maritimus (strain SCM1) Archaea › Thaumarchaeota › Nitrosopumilales › Nitrosopumilaceae › Nitrosopumilus Reference proteome set (1,795) |
| Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Pyrobaculum Reference proteome set (2,590) |
| Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus Reference proteome set (2,045) |
| Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Thermococcus kodakaraensis (strain KOD1)) Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus Reference proteome set (2,301) |
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)  Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus Reference proteome set (2,938) |
| Thermofilum pendens (strain Hrk 5) Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermofilaceae › Thermofilum Reference proteome set (1,876) |
| Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) Archaea › Euryarchaeota › Thermoplasmata › Thermoplasmatales › Thermoplasmataceae › Thermoplasma Reference proteome set (1,482) |
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