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| Acineta Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Phyllopharyngea › Suctoria › Endogenida › Acinetidae |
| Acineta sp. OSW-2003-1 Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Phyllopharyngea › Suctoria › Endogenida › Acinetidae › Acineta |
| Acineta sp. OSW-2003-2 Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Phyllopharyngea › Suctoria › Endogenida › Acinetidae › Acineta |
| Acineta sp. OSW-2003-3 Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Phyllopharyngea › Suctoria › Endogenida › Acinetidae › Acineta |
| Acinetidae Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Phyllopharyngea › Suctoria › Endogenida |
| Aconoidasida Eukaryota › Alveolata › Apicomplexa |
| Actinocepahlidae Eukaryota › Alveolata › Apicomplexa › Gregarinia › Eugregarinida |
| Actinocephalidae Eukaryota › Alveolata › Apicomplexa › Gregarinia › Eugregarinida |
| Adeleidae Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Adeleorina |
| Adeleorina Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida |
| Adelina Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Adeleorina › Adeleidae |
| Adelina bambarooniae Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Adeleorina › Adeleidae › Adelina |
| Adelina dimidiata Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Adeleorina › Adeleidae › Adelina |
| Adelina grylli Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Adeleorina › Adeleidae › Adelina |
| Adenoides Eukaryota › Alveolata › Dinophyceae › Gonyaulacales › Gonyaulacaceae |
Adenoides eludens  Eukaryota › Alveolata › Dinophyceae › Gonyaulacales › Gonyaulacaceae › Adenoides |
| Agamococcidiorida Eukaryota › Alveolata › Apicomplexa › Coccidia |
| Aggregata Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Eimeriorina › Aggregatidae |
| Aggregata eberthi Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Eimeriorina › Aggregatidae › Aggregata |
| Aggregata octopiana Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Eimeriorina › Aggregatidae › Aggregata |
| Aggregatidae Eukaryota › Alveolata › Apicomplexa › Coccidia › Eucoccidiorida › Eimeriorina |
| Akashiwo Eukaryota › Alveolata › Dinophyceae › Gymnodiniales › Gymnodiniaceae |
| Akashiwo sanguinea Eukaryota › Alveolata › Dinophyceae › Gymnodiniales › Gymnodiniaceae › Akashiwo |
| Akashiwo sp. AP-LIS1 Eukaryota › Alveolata › Dinophyceae › Gymnodiniales › Gymnodiniaceae › Akashiwo |
| Akashiwo sp. AP-LIS2 Eukaryota › Alveolata › Dinophyceae › Gymnodiniales › Gymnodiniaceae › Akashiwo |
