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Overview

Proteome nameMusa acuminata subsp. malaccensis - Reference proteome
Proteins36,474
Proteome IDiUP000012960
Straincv. Doubled-haploid Pahang [DH-Pahang]
Taxonomy214687 - Musa acuminata subsp. malaccensis
Last modifiedMarch 4, 2017
Genome assemblyi GCA_000313855.2 from EnsemblPlants
Genome annotationi EnsemblPlants

Musa acuminata is a diploid wild species of banana. Bananas are perennial monocotyledonous herbs of the order Zingiberales to which ginger and cardamom also belong.

Bananas are very important for food security in many tropical and subtropical countries and a large range of types can be found, including those used as vegetables and as fruits.

While domestication involved hybridization between diverse species and subspecies, much of the current production relies on clones derived from one triploid genotype - Cavendish.

Banana cultivars are derived mainly from either Musa acuminata and/or Musa balbisiana. They are sometimes diploid but are generally triploid. The genome sequenced was from DH-Pahang, a double-haploid Musa acuminata genotype of the subspecies malaccensis that contributed one of the three Musa acuminata genomes of Cavendish. Musa acuminata has a haploid chromosome number of 11, containing 390 Mb with 36,000 protein encoding genes.

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome 52970
Chromosome 33248
Chromosome 43362
Chromosome 63694
Chromosome 72762
Chromosome 83453
Chromosome 93106
Chromosome 112677
Chromosome 103153
Chromosome 12832
Chromosome 22327
Unplaced
2922

Publications

  1. "The banana (Musa acuminata) genome and the evolution of monocotyledonous plants."
    D Hont A., Denoeud F., Aury J.M., Baurens F.C., Carreel F., Garsmeur O., Noel B., Bocs S., Droc G., Rouard M., Da Silva C., Jabbari K., Cardi C., Poulain J., Souquet M., Labadie K., Jourda C., Lengelle J.
    , Roudier-Goud M., Alberti A., Bernard M., Correa M., Ayyampalayam S., Mckain M.R., Leebens-Mack J., Burgess D., Freeling M., Mbeguie-A-Mbeguie D., Chabannes M., Wicker T., Panaud O., Barbosa J., Hribova E., Heslop-Harrison P., Habas R., Rivallan R., Francois P., Poiron C., Kilian A., Burthia D., Jenny C., Bakry F., Brown S., Guignon V., Kema G., Dita M., Waalwijk C., Joseph S., Dievart A., Jaillon O., Leclercq J., Argout X., Lyons E., Almeida A., Jeridi M., Dolezel J., Roux N., Risterucci A.M., Weissenbach J., Ruiz M., Glaszmann J.C., Quetier F., Yahiaoui N., Wincker P.
    Nature 2012:213-217(2012)
  2. "The banana (Musa acuminata) genome and the evolution of monocotyledonous plants."
    D'Hont A., Denoeud F., Aury J.M., Baurens F.C., Carreel F., Garsmeur O., Noel B., Bocs S., Droc G., Rouard M., Da Silva C., Jabbari K., Cardi C., Poulain J., Souquet M., Labadie K., Jourda C., Lengelle J.
    , Rodier-Goud M., Alberti A., Bernard M., Correa M., Ayyampalayam S., Mckain M.R., Leebens-Mack J., Burgess D., Freeling M., Mbeguie-A-Mbeguie D., Chabannes M., Wicker T., Panaud O., Barbosa J., Hribova E., Heslop-Harrison P., Habas R., Rivallan R., Francois P., Poiron C., Kilian A., Burthia D., Jenny C., Bakry F., Brown S., Guignon V., Kema G., Dita M., Waalwijk C., Joseph S., Dievart A., Jaillon O., Leclercq J., Argout X., Lyons E., Almeida A., Jeridi M., Dolezel J., Roux N., Risterucci A.M., Weissenbach J., Ruiz M., Glaszmann J.C., Quetier F., Yahiaoui N., Wincker P.
    Nature 2012:213-217(2012) [PubMed] [Europe PMC] [Abstract]