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Overview

Proteome nameSus scrofa - Reference proteome
Proteins18,165
Proteome IDiUP000008227
StrainDuroc
Taxonomy9823 - Sus scrofa
Last modifiedAugust 23, 2017
Genome assembly and annotationi GCA_000003025.6 from Ensembl
© imagess3.enature.com

Sus scrofa, the domestic pig, is a member of the Artiodactyla (even-toed ungulates). First domesticated around 10,000 years ago, they are an important agricultural species worldwide. In addition, pigs are useful as a non-primate biomedical model organism, especially for the study of complex traits (e.g. obesity, cardiovascular disease, and arthritis) and for xenotransplantation experiments.

The first draft genome was released in 2012 by the Swine Genome Sequencing Consortium, using sequence derived from a single Duroc sow (Duroc 2-14). Assembly 10.2 contains approximately 2.6 Gb of sequence and 21,000 protein-coding genes.

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome 11508
Chromosome 21575
Chromosome 31126
Chromosome 41010
Chromosome 5885
Chromosome 61618
Chromosome 71139
Chromosome 8604
Chromosome 9991
Chromosome 10360
Chromosome 11279
Chromosome 12903
Chromosome 131112
Chromosome 141103
Chromosome 15676
Chromosome 16304
Chromosome 17512
Chromosome 18373
Chromosome X856
Mitochondrion18
Unplaced
1201
Chromosome Y18

Publications

  1. "Complete nucleotide sequence of pig (Sus scrofa) mitochondrial genome and dating evolutionary divergence within artiodactyla."
    Lin C.S., Sun Y.L., Liu C.Y., Yang P.C., Chang L.C., Cheng I.C., Mao S.J.T., Huang M.C.
    Gene 1999:107-114(1999) [PubMed] [Europe PMC] [Abstract]
  2. Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
  3. Datahose
    Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases