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Overview

Proteome nameAlicycliphilus denitrificans DSM 14773 - Reference proteome
Proteins4,620
Proteome IDiUP000007938
StrainDSM 14773 / CIP 107495 / K601
Taxonomy596154 - Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601)
Last modifiedFebruary 4, 2017
Genome assemblyGCA_000204645.1
Pan proteomei This proteome is part of the Alicycliphilus denitrificans DSM 14773 pan proteome (fasta)

Chlorate contamination of groundwater is a big problem that is often associated with the manufacture and use of explosives and munitions. To clean up chlorate-contaminated areas, some researchers turn to bacteria that can break down these compounds. These microbes can produce oxygen in anaerobic conditions, which can speed up the process of breaking down other compounds that do not degrade quickly in anaerobic environments such as the hydrocarbon benzene. Adding chlorate-reducing bacteria to contaminated, oxygen-poor environments could therefore encourage the growth of other bacteria that need oxygen to break down other compounds found at these sites. Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) is an aerobic, Gram-negative bacterium isolated from a facultative aerobic sewage sludge. A. denitrificans is able to degrade benzene coupled to chlorate reduction. (Adapted from: http://genome.jgi-psf.org/alide/alide.home.html and PMID 7386037).

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome4531
Plasmid pALIDE20189

Publications

  1. "Complete sequence of plasmid of Alicycliphilus denitrificans K601."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.
    , Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
  2. "Complete sequence of chromosome of Alicycliphilus denitrificans K601."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Zeytun A., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Oosterkamp M.
    , Pieper D., van Berkel W., Langenhoff A., Smidt H., Stams A., Woyke T.
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases