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Overview

Proteome nameRhodobacter sphaeroides ATCC 17023 - Reference proteome
Proteins4,285
Proteome IDiUP000002703
StrainATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158
Taxonomy272943 - Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Last modifiedFebruary 4, 2017
Genome assembly and annotationi GCA_000012905.2 from ENA/EMBL
Pan proteomei This proteome is part of the Rhodobacter sphaeroides ATCC 17023 pan proteome (fasta)

Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) is an alphaproteobacterium. It harbors 2 chromosomes and five plasmids. It possesses an extensive range of energy acquiring mechanisms including photosynthesis, lithotrophy, aerobic and anaerobic respiration. It can also fix molecular nitrogen, synthesize important tetrapyrroles, chlorophylls, heme, and vitamin B12. It has also been shown to detoxify a number of metal oxides and oxyanions and is the subject of ongoing studies on bioremediation and is the first free living bacterium known to utilize the regulatory systems associated with quorum-sensing.

2 of the plasmids of this strain, plasmid A and plasmid E have not been fully sequenced, we include them here so the most complete proteome possible will be available.

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome 13038
Chromosome 2845
Plasmid pRS241b103
Plasmid pRS241c89
Plasmid pRS241d94
Plasmid A87
Plasmid E29

Publications

  1. "Complete sequence of plasmid C of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
  2. "Finished sequence of plasmid E of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
  3. "Finished sequence of plasmid A of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
  4. "Complete sequence of plasmid D of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
  5. "Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
  6. "Complete sequence of chromosome 2 of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
  7. "Complete sequence of plasmid B of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases