Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

Proteome nameFrankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) - Reference proteome
Proteins4,441
Proteome IDiUP000001937
StrainDSM 45818 / CECT 9043 / CcI3
Taxonomy106370 - Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3)
Last modifiedFebruary 4, 2017
Genome assembly and annotationi GCA_000013345.1 from ENA/EMBL
Pan proteomei This proteome is part of the Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) pan proteome (fasta)

Frankia sp. are filamentous bacteria that grow by hyphal branching and tip extension. They produce three cell types during growth: vegetative hyphae, sporangiospores and lipid-enveloped cellular structures known as "vesicles". Frankia sp. have the ability to form symbiotic nitrogen-fixing root nodules on certain woody angiosperms, termed "actinorhizal plants". The vesicle cell type develops during N-starvation and contains the O2-labile nitrogenase. During symbiosis, they supply sufficient combined nitrogen so that the plant can grow without added nitrogen. Frankia thus can supply most or all of the host plant nitrogen needs. Consequently, actinorhizal plants colonize and often thrive in soils that are low in combined nitrogen. This type of symbiosis adds a large proportion of new nitrogen to several ecosystems. It constitutes the major N2-fixing symbioses in temperate forests, dry chaparral and matorral, coastal dunes, alpine communities and in colder regions such as in Scandinavia, Canada, Alaska or New Zealand where legumes are insignificant or absent. Frankiae have all housekeeping genes necessary for saprophytic existence plus genes for sporulation, vesicle development, symbiosis, N2 fixation and secondary metabolite production.

Frankia sp. strain CcI3 was isolated in 1983 at Harvard Forest in John Torrey's lab. It is a member of the narrow host range "Casuarinaceae" strain (Cluster 1 subclade). It grows slowly on organic acids such as propionate or pyruvate and will grow on some complex media. It is resistant to kanamycin and, like many actinomycetes, to nalidixic acid. Its ultrastructure has been studied both with respect to its free-living existence and its presence in nodules of Casuarina sp. The Casuarinaceae is a tropical family of trees and shrubs whose natural range includes Australia and the Melanesian region of the Pacific. They have been planted on islands and in coastal regions of the Indian Ocean, New Zealand, Africa and North and South America, especially in the Caribbean islands, Florida and California where they have been used for soil stabilization, as windbreaks and for lumber and firewood.

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome4441