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Overview

Proteome nameSynechocystis sp. - Reference proteome
Proteins3,507
Proteome IDiUP000001425
StrainPCC 6803 / Kazusa
Taxonomy1111708 - Synechocystis sp. (strain PCC 6803 / Kazusa)
Last modifiedFebruary 4, 2017
Genome assembly and annotationi GCA_000009725.1 from ENA/EMBL
Pan proteomei This proteome is part of the Synechocystis sp. pan proteome (fasta)

Model cyanobacterium that carries a complete set of genes for oxygenic photosynthesis, Synechocystis is also studied for its stress response and metabolism. The first glucose-tolerant strain was sequenced in 1996 (this strain Kazusa, SYNY3),while a second glucose tolerant strain, Synechocystis GT-S, and has been maintained as frozen glycerol stocks since the late 1980s. Careful comparison reveals that there is a single nucleotide change and two IS insertions between the Kazusa strain and the GT-S strain, with some changes to the sequence of the Kazusa strain also noticed. Although they have not been resubmitted strain GT-S also encodes the 4 plasmids sound in SYNY3 (adapted from PMID 21803841).

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome3140
Plasmid pSYSM132
Plasmid pSYSA106
Plasmid pSYSG47
Plasmid pSYSX85

Publications

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 1996:109-136(1996) [PubMed] [Europe PMC] [Abstract]
  2. "Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803."
    Kaneko T., Nakamura Y., Sasamoto S., Watanabe A., Kohara M., Matsumoto M., Shimpo S., Yamada M., Tabata S.
    DNA Res. 2003:221-228(2003) [PubMed] [Europe PMC] [Abstract]