Proteomes - Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Parastagonospora nodorum)
|Proteome name||Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) Glume blotch fungus Parastagonospora nodorum - Reference proteome|
|Strain||SN15 / ATCC MYA-4574 / FGSC 10173|
|Taxonomy||321614 - Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)|
|Last modified||February 6, 2017|
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173), the glume blotch fungus, is a major wheat pathogen, causing severe crop loss. The macroscopic symptoms of infection are lens-shaped lesions in which brown pycnidia develop in appropriate conditions. Lesions often form in stem nodes, hence the species name "nodorum". The most damaging aspect of the disease is infection of the wheat head. Availability of the genome sequence will enhance understanding of the functions of the genes controlling pathogenicity with a view to developing novel control methods.
The genome sequence analysis was published in 2007 and showed that the fungus contains a minimum of 10,762 nuclear genes with an additional 5,000 genes which are predicted but have no EST support. Despite the lack of evidence, these have been retained in the genome for further possible validation and analysis. The sequenced strain, SN15 / ATCC MYA-4574 / FGSC 10173, was collected in western Australia.
ComponentsiDownloadView all proteins
|Component name||Genome Accession(s)||Proteins|
|Unassembled WGS sequence||15979|
- "Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum."
Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L., Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E., Torriani S.F.F., McDonald B.A., Oliver R.P.
Plant Cell 2007:3347-3368(2007) [PubMed] [Europe PMC] [Abstract]