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RALF, a growing family of plant peptide hormones | Cross-references to ChEMBL and PaxDb | Removal of cross-reference to ECO2DBASE and TIGR | New format of the documentation files yeast.txt, yeast chromosome files, pombe.txt and calbican.txt
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Sex by deception | Update to Reference proteomes in UniProtKB
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10K UniProtKB/Swiss-Prot Arabidopsis thaliana entries | Cross-references to Allergome
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Program › Plant protein annotation program
References
- "The UniProtKB/Swiss-Prot knowledgebase and its Plant Proteome Annotation Program."
Schneider M, Lane L, Boutet E, Lieberherr D, Tognolli M, Bougueleret L, Bairoch A
J Proteomics 72(3):567-73(2009) [PubMed:19084081] - "The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed:18089549] - "Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
Rice Annotation Project , Itoh T, Tanaka T, Barrero RA, Yamasaki C, Fujii Y, Hilton PB, Antonio BA, Aono H, Apweiler R, Bruskiewich R, Bureau T, Burr F, Costa de Oliveira A, Fuks G, Habara T, Haberer G, Han B, Harada E, Hiraki AT, Hirochika H, Hoen D, Hokari H, Hosokawa S, Hsing YI, Ikawa H, Ikeo K, Imanishi T, Ito Y, Jaiswal P, Kanno M, Kawahara Y, Kawamura T, Kawashima H, Khurana JP, Kikuchi S, Komatsu S, Koyanagi KO, Kubooka H, Lieberherr D, Lin YC, Lonsdale D, Matsumoto T, Matsuya A, McCombie WR, Messing J, Miyao A, Mulder N, Nagamura Y, Nam J, Namiki N, Numa H, Nurimoto S, O'Donovan C, Ohyanagi H, Okido T, Oota S, Osato N, Palmer LE, Quetier F, Raghuvanshi S, Saichi N, Sakai H, Sakai Y, Sakata K, Sakurai T, Sato F, Sato Y, Schoof H, Seki M, Shibata M, Shimizu Y, Shinozaki K, Shinso Y, Singh NK, Smith-White B, Takeda J, Tanino M, Tatusova T, Thongjuea S, Todokoro F, Tsugane M, Tyagi AK, Vanavichit A, Wang A, Wing RA, Yamaguchi K, Yamamoto M, Yamamoto N, Yu Y, Zhang H, Zhao Q, Higo K, Burr B, Gojobori T, Sasaki T
Genome Res. 17(2):175-83(2007) [PubMed:17210932] - "Plant protein annotation in the UniProt Knowledgebase."
Schneider M, Bairoch A, Wu CH, Apweiler R
Plant Physiol. 138(1):59-66(2005) [PubMed:15888679] - "GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts."
Aubourg S., Brunaud V., Bruyere C., Cock M., Cooke R., Cottet A., Couloux A., Dehais P., Deleage G., Duclert A., Echeverria M., Eschbach A., Falconet D., Filippi G., Gaspin C., Geourjon C., Grienenberger J.M., Houlne G., Jamet E., Lechauve F., Leleu O., Leroy P., Mache R., Meyer C., Nedjari H., Negrutiu I., Orsini V., Peyretaillade E., Pommier C., Raes J., Risler J.L., Riviere S., Rombauts S., Rouze P., Schneider M., Schwob P., Small I., Soumayet-Kampetenga G., Stankovski D., Toffano C., Tognolli M., Caboche M., Lecharny A.
Nucleic Acids Res. 33:D641-6(2005) [PubMed:15608279] - "The Swiss-Prot protein knowledgebase and ExPASy: providing the plant community with high quality proteomic data and tools."
Schneider M., Tognolli M., Bairoch A.
Plant Physiol. Biochem. 42:1013-1021(2004) [PubMed:15707838]