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Drosophila protein annotation project

Statistics

UniProt release 2016_01 - Jan-20, 2016 contains a total of 550,299 reviewed entries, which includes 5,594 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,273 reviewed entries.

Number of canonical and isoform protein sequences: 4,603 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 52.7%
at transcript level 41.3%
inferred from homology 5.5%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,272 4,521 unique 100%
Alternative products 688 2,295 21%
General annotation 3,257 16,705 99.5%
Function 2,686 2,715 82.1%
Catalytic activity 774 840 23.6%
Subcellular location 0 0 N/A
Sequence annotation 3,065 40,571 93.6%
Amino acid modifications 1,378 7,404 42.1%
Cross-references 3,273 184,258 100%
EMBL 3,272 19,460 100%
InterPro 3,129 10,595 95.6%
PDB 285 687 8.7%
RefSeq 3,235 6,918 98.8%
FlyBase 3,273 3,393 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.4% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,236 100%
Function 270 275 77.4%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 301 2,186 86.2%
Amino acid modifications 83 290 23.8%
Cross-references 349 8,943 100%
EMBL 349 749 100%
InterPro 335 1,123 96%
PDB 0 0 N/A
RefSeq 343 352 98.3%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.