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Program › Drosophila protein annotation program
Statistics
UniProt release 2013_05 - May-01, 2013 contains a total of 540,052 reviewed entries, which includes 5,515 entries from 101 species of Drosophila.
Drosophila melanogaster (Fruit fly) - 3,195 reviewed entries.
Number of canonical and isoform protein sequences: 4,470 (download data in FASTA format)
| Evidence for the existence of protein | Percentage of entries |
|---|---|
| at protein level | 50.2% |
| at transcript level | 42.1% |
| inferred from homology | 6.8% |
| predicted | 0.9% |
| uncertain | N/A |
| Annotation categories | Entries with | Number of annotations | Coverage |
|---|---|---|---|
| PubMed citations | 3,194 | 4,068 unique | 100% |
| Alternative products | 690 | 2,254 | 21.6% |
| General annotation | 3,187 | 20,053 | 99.7% |
| Function | 2,570 | 2,596 | 80.4% |
| Catalytic activity | 745 | 801 | 23.3% |
| Subcellular location | 2,334 | 3,967 | 73.1% |
| Sequence annotation | 2,987 | 38,011 | 93.5% |
| Amino acid modifications | 1,366 | 7,215 | 42.8% |
| Cross-references | 3,195 | 123,774 | 100% |
| EMBL | 3,194 | 18,990 | 100% |
| InterPro | 3,026 | 9,752 | 94.7% |
| PDB | 172 | 483 | 5.4% |
| RefSeq | 3,162 | 6,376 | 99% |
| FlyBase | 3,195 | 3,315 | 100% |
100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.
96.6% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.
Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.
Number of canonical and isoform protein sequences: 357 (download data in FASTA format)
| Evidence for the existence of protein | Percentage of entries |
|---|---|
| at protein level | 1.4% |
| at transcript level | 3.2% |
| inferred from homology | 94.8% |
| predicted | 0.6% |
| uncertain | N/A |
| Annotation categories | Entries with | Number of annotations | Coverage |
|---|---|---|---|
| PubMed citations | 349 | 51 unique | 100% |
| Alternative products | 5 | 13 | 1.4% |
| General annotation | 349 | 1,707 | 100% |
| Function | 270 | 275 | 77.4% |
| Catalytic activity | 80 | 91 | 22.9% |
| Subcellular location | 266 | 448 | 76.2% |
| Sequence annotation | 299 | 2,104 | 85.7% |
| Amino acid modifications | 83 | 296 | 23.8% |
| Cross-references | 349 | 7,036 | 100% |
| EMBL | 349 | 750 | 100% |
| InterPro | 331 | 1,002 | 94.8% |
| PDB | 0 | 0 | N/A |
| RefSeq | 343 | 351 | 98.3% |
| FlyBase | 349 | 350 | 100% |
100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.
93.7% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.