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Drosophila protein annotation project

Statistics

UniProt release 2017_03 - Mar-15, 2017 contains a total of 553,941 reviewed entries, which includes 5,773 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,451 reviewed entries.

Number of canonical and isoform protein sequences: 4,766 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 51.2%
at transcript level 42.7%
inferred from homology 5.5%
predicted 0.6%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,451 4,908 unique 100%
Alternative products 690 2,282 20%
General annotation 3,417 15,517 99%
Function 2,868 2,905 83.1%
Catalytic activity 824 893 23.9%
Subcellular location 0 0 N/A
Sequence annotation 3,233 43,111 93.7%
Amino acid modifications 1,440 7,877 41.7%
Cross-references 3,451 158,884 100%
EMBL 3,450 20,073 100%
InterPro 3,288 11,053 95.3%
PDB 306 763 8.9%
RefSeq 3,415 7,272 99%
FlyBase 3,451 3,567 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

98.1% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 94.8%
predicted 0.6%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,041 100%
Function 271 276 77.7%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 304 2,204 87.1%
Amino acid modifications 82 289 23.5%
Cross-references 349 7,518 100%
EMBL 349 749 100%
InterPro 338 1,144 96.8%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

94.6% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.