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Drosophila protein annotation project

Statistics

UniProt release 2016_07 - Jul-06, 2016 contains a total of 551,705 reviewed entries, which includes 5,646 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,328 reviewed entries.

Number of canonical and isoform protein sequences: 4,608 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 50.5%
at transcript level 43.3%
inferred from homology 5.8%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,327 4,689 unique 100%
Alternative products 668 2,225 20.1%
General annotation 3,312 17,021 99.5%
Function 2,745 2,776 82.5%
Catalytic activity 782 848 23.5%
Subcellular location 0 0 N/A
Sequence annotation 3,119 41,593 93.7%
Amino acid modifications 1,398 7,600 42%
Cross-references 3,328 187,034 100%
EMBL 3,327 19,619 100%
InterPro 3,182 10,640 95.6%
PDB 294 722 8.8%
RefSeq 3,286 7,010 98.7%
FlyBase 3,328 3,448 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.9% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,239 100%
Function 270 275 77.4%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 304 2,197 87.1%
Amino acid modifications 82 289 23.5%
Cross-references 349 8,967 100%
EMBL 349 749 100%
InterPro 336 1,115 96.3%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92.8% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.