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Drosophila protein annotation program

Statistics

UniProt release 2015_07 - Jun-24, 2015 contains a total of 548,872 reviewed entries, which includes 5,568 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,247 reviewed entries.

Number of canonical and isoform protein sequences: 4,562 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 52.1%
at transcript level 41.8%
inferred from homology 5.7%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,246 4,417 unique 100%
Alternative products 681 2,275 21%
General annotation 3,231 16,457 99.5%
Function 2,656 2,684 81.8%
Catalytic activity 769 832 23.7%
Subcellular location 0 0 N/A
Sequence annotation 3,040 40,015 93.6%
Amino acid modifications 1,366 7,310 42.1%
Cross-references 3,247 178,018 100%
EMBL 3,246 19,344 100%
InterPro 3,105 10,476 95.6%
PDB 274 658 8.4%
RefSeq 3,211 6,827 98.9%
FlyBase 3,247 3,367 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

96.9% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,234 100%
Function 270 275 77.4%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 301 2,169 86.2%
Amino acid modifications 83 290 23.8%
Cross-references 349 9,557 100%
EMBL 349 749 100%
InterPro 332 1,106 95.1%
PDB 0 0 N/A
RefSeq 343 352 98.3%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.