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Drosophila protein annotation project

Statistics

UniProt release 2016_11 - Nov-30, 2016 contains a total of 553,231 reviewed entries, which includes 5,721 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,401 reviewed entries.

Number of canonical and isoform protein sequences: 4,696 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 51%
at transcript level 42.8%
inferred from homology 5.7%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,401 5,406 unique 100%
Alternative products 679 2,251 20%
General annotation 3,384 17,488 99.5%
Function 2,820 2,855 82.9%
Catalytic activity 798 867 23.5%
Subcellular location 0 0 N/A
Sequence annotation 3,189 42,403 93.8%
Amino acid modifications 1,425 7,785 41.9%
Cross-references 3,401 0 100%
EMBL 3,400 0 100%
InterPro 3,247 0 95.5%
PDB 301 0 8.9%
RefSeq 3,363 0 98.9%
FlyBase 3,401 0 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

98% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 54 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,245 100%
Function 271 276 77.7%
Catalytic activity 80 91 22.9%
Subcellular location 0 0 N/A
Sequence annotation 306 2,207 87.7%
Amino acid modifications 82 289 23.5%
Cross-references 349 0 100%
EMBL 349 0 100%
InterPro 337 0 96.6%
PDB 0 0 N/A
RefSeq 339 0 97.1%
FlyBase 349 0 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

93.1% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.