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Drosophila protein annotation project

Statistics

UniProt release 2016_04 - Apr-13, 2016 contains a total of 550,960 reviewed entries, which includes 5,601 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,283 reviewed entries.

Number of canonical and isoform protein sequences: 4,578 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 52.7%
at transcript level 41.4%
inferred from homology 5.5%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,282 4,563 unique 100%
Alternative products 672 2,244 20.5%
General annotation 3,267 16,755 99.5%
Function 2,697 2,726 82.2%
Catalytic activity 775 841 23.6%
Subcellular location 0 0 N/A
Sequence annotation 3,075 40,850 93.7%
Amino acid modifications 1,377 7,407 41.9%
Cross-references 3,283 185,450 100%
EMBL 3,282 19,473 100%
InterPro 3,138 10,640 95.6%
PDB 289 713 8.8%
RefSeq 3,236 6,915 98.6%
FlyBase 3,283 3,403 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.6% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,238 100%
Function 270 275 77.4%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 302 2,192 86.5%
Amino acid modifications 83 290 23.8%
Cross-references 349 8,991 100%
EMBL 349 749 100%
InterPro 335 1,125 96%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.