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Drosophila protein annotation project

Statistics

UniProt release 2016_05 - May-11, 2016 contains a total of 551,193 reviewed entries, which includes 5,616 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,298 reviewed entries.

Number of canonical and isoform protein sequences: 4,591 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 52.6%
at transcript level 41.5%
inferred from homology 5.5%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,297 4,614 unique 100%
Alternative products 670 2,240 20.3%
General annotation 3,282 16,856 99.5%
Function 2,713 2,742 82.3%
Catalytic activity 777 843 23.6%
Subcellular location 0 0 N/A
Sequence annotation 3,090 41,143 93.7%
Amino acid modifications 1,386 7,530 42%
Cross-references 3,298 185,866 100%
EMBL 3,297 19,527 100%
InterPro 3,155 10,559 95.7%
PDB 294 720 8.9%
RefSeq 3,253 6,945 98.6%
FlyBase 3,298 3,418 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.5% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,238 100%
Function 270 275 77.4%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 303 2,195 86.8%
Amino acid modifications 83 290 23.8%
Cross-references 349 8,980 100%
EMBL 349 749 100%
InterPro 336 1,115 96.3%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92.3% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.