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Drosophila protein annotation project

Statistics

UniProt release 2017_07 - Jul-05, 2017 contains a total of 555,100 reviewed entries, which includes 5,793 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,471 reviewed entries.

Number of canonical and isoform protein sequences: 5,935 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 51.3%
at transcript level 42.6%
inferred from homology 5.5%
predicted 0.6%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,471 4,939 unique 100%
Alternative products 696 2,312 20.1%
General annotation 3,437 15,632 99%
Function 2,891 2,932 83.3%
Catalytic activity 826 894 23.8%
Subcellular location 0 0 N/A
Sequence annotation 3,253 43,396 93.7%
Amino acid modifications 1,442 7,889 41.5%
Cross-references 3,471 158,131 100%
EMBL 3,470 20,147 100%
InterPro 3,317 11,118 95.6%
PDB 310 775 8.9%
RefSeq 3,438 7,316 99%
FlyBase 3,471 3,586 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.9% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 449 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 94.8%
predicted 0.6%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,041 100%
Function 271 276 77.7%
Catalytic activity 80 90 22.9%
Subcellular location 0 0 N/A
Sequence annotation 304 2,207 87.1%
Amino acid modifications 82 289 23.5%
Cross-references 349 7,803 100%
EMBL 349 749 100%
InterPro 340 1,155 97.4%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

94.3% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.