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Drosophila protein annotation project

Statistics

UniProt release 2016_06 - Jun-08, 2016 contains a total of 551,385 reviewed entries, which includes 5,624 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,306 reviewed entries.

Number of canonical and isoform protein sequences: 4,598 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 52.7%
at transcript level 41.5%
inferred from homology 5.4%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,305 4,625 unique 100%
Alternative products 670 2,239 20.3%
General annotation 3,290 16,900 99.5%
Function 2,721 2,750 82.3%
Catalytic activity 778 844 23.5%
Subcellular location 0 0 N/A
Sequence annotation 3,098 41,248 93.7%
Amino acid modifications 1,387 7,515 42%
Cross-references 3,306 184,301 100%
EMBL 3,305 19,547 100%
InterPro 3,161 10,579 95.6%
PDB 294 720 8.9%
RefSeq 3,265 6,968 98.8%
FlyBase 3,306 3,426 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.5% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,238 100%
Function 270 275 77.4%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 303 2,196 86.8%
Amino acid modifications 82 289 23.5%
Cross-references 349 8,987 100%
EMBL 349 749 100%
InterPro 336 1,115 96.3%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92.6% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.