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Drosophila protein annotation project

Statistics

UniProt release 2016_08 - Sep-07, 2016 contains a total of 551,987 reviewed entries, which includes 5,659 entries from 101 species of Drosophila.

Drosophila melanogaster (Fruit fly) - 3,341 reviewed entries.

Number of canonical and isoform protein sequences: 4,627 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 50.6%
at transcript level 43.2%
inferred from homology 5.8%
predicted 0.4%
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 3,340 4,724 unique 100%
Alternative products 670 2,233 20.1%
General annotation 3,325 17,128 99.5%
Function 2,760 2,791 82.6%
Catalytic activity 782 848 23.4%
Subcellular location 0 0 N/A
Sequence annotation 3,132 41,769 93.7%
Amino acid modifications 1,404 7,629 42%
Cross-references 3,341 188,123 100%
EMBL 3,340 19,674 100%
InterPro 3,194 10,696 95.6%
PDB 296 726 8.9%
RefSeq 3,300 7,042 98.8%
FlyBase 3,341 3,461 100%

100% of reviewed Drosophila melanogaster entries are annotated with at least one keyword.

97.9% of reviewed Drosophila melanogaster entries are annotated with at least one GO (Gene Ontology) term.

Drosophila pseudoobscura pseudoobscura - 349 reviewed entries.

Number of canonical and isoform protein sequences: 357 (download data in FASTA format)

Evidence for the existence of protein Percentage of entries
at protein level 1.4%
at transcript level 3.2%
inferred from homology 95.4%
predicted N/A
uncertain N/A

Annotation categories Entries with Number of annotations Coverage
PubMed citations 349 51 unique 100%
Alternative products 5 13 1.4%
General annotation 349 1,240 100%
Function 271 276 77.7%
Catalytic activity 81 92 23.2%
Subcellular location 0 0 N/A
Sequence annotation 304 2,200 87.1%
Amino acid modifications 82 289 23.5%
Cross-references 349 8,671 100%
EMBL 349 749 100%
InterPro 336 1,127 96.3%
PDB 0 0 N/A
RefSeq 339 388 97.1%
FlyBase 349 350 100%

100% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one keyword.

92.8% of reviewed Drosophila pseudoobscura pseudoobscura entries are annotated with at least one GO (Gene Ontology) term.