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Program › Automatic annotation program
References
- "HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot."
Lima T, Auchincloss AH, Coudert E, Keller G, Michoud K, Rivoire C, Bulliard V, de Castro E, Lachaize C, Baratin D, Phan I, Bougueleret L, Bairoch A
Nucleic Acids Res. 37(Database issue):D471-8(2009) [PubMed:18849571] - "Filtering erroneous protein annotation."
Wieser D, Kretschmann E, Apweiler R
Bioinformatics 20 Suppl 1:i342-7(2004) [PubMed:15262818] - "Protein family classification and functional annotation."
Wu CH, Huang H, Yeh LS, Barker WC
Comput Biol Chem 27(1):37-47(2003) [PubMed:12798038] - "Applications of InterPro in protein annotation and genome analysis."
Biswas M, O'Rourke JF, Camon E, Fraser G, Kanapin A, Karavidopoulou Y, Kersey P, Kriventseva E, Mittard V, Mulder N, Phan I, Servant F, Apweiler R
Brief. Bioinformatics 3(3):285-95(2002) [PubMed:12230037] - "Automatic rule generation for protein annotation with the C4.5 data mining algorithm applied on SWISS-PROT."
Kretschmann E, Fleischmann W, Apweiler R
Bioinformatics 17(10):920-6(2001) [PubMed:11673236] - "A novel method for automatic functional annotation of proteins."
Fleischmann W, Möller S, Gateau A, Apweiler R
Bioinformatics 15(3):228-33(1999) [PubMed:10222410]