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Swiss-Prot release 42.0

Published October 1, 2003

  ------------------------------------------------------------------------
                                          Swiss-Prot Protein Knowledgebase
                                                             Release Notes
                                                 Release 42, October  2003
  ------------------------------------------------------------------------


                             Table of contents

1) Warning
2) Introduction
3) Status of the model organisms
4) We need your help
5) Some statistics


1) WARNING

Please note that the format of the release notes changed. We now make
updated documents available also between major Swiss-Prot releases. The
distinct sections of this document have moved to the following sites:

    * Description of the changes made to Swiss-Prot since the last
      release: http://www.expasy.org/sprot/relnotes/sp_news.html. This
      new document contains all recent modifications in Swiss-Prot
      including minor changes with no impact on the work of software
      developpers. Thus this document contains more information than
      announced in the document 'sp_soon.html' (see below).

    * Forthcoming changes: all modifications, which have an impact on
      the Swiss-Prot format are announced in the document:
      http://www.expasy.org/sprot/relnotes/sp_soon.html.

    * Status of the documentation files:
      http://www.expasy.org/sprot/userman.html#documentation

    * The ExPASy World-Wide Web server:
          o Explicit general and continuously updated documentation:
            http://www.expasy.org/doc/expasy.pdf
          o History of changes, improvements and new features:
            http://www.expasy.org/history.html
          o Swiss-Flash, a service that reports news of databases,
            software and service developments:
            http://www.expasy.org/swiss-flash/

    * TrEMBL - a supplement to Swiss-Prot:
      ftp://ftp.ebi.ac.uk/pub/databases/trembl/relnotes.txt

    * FTP access to Swiss-Prot and TrEMBL:
      http://www.expasy.org/sprot/userman.html#ftp and
      http://www.expasy.org/sprot/download.html

    * PROSITE release notes:
      http://www.expasy.org/prosite/psrelnot.html

    * Release statistics: http://www.expasy.org/sprot/relnotes/relstat.html

    * Relationships between Swiss-Prot and some biomolecular databases:
      http://www.expasy.org/sprot/userman.html#relship


2) INTRODUCTION

Release 42.0 of Swiss-Prot contains 135'850 sequence entries, comprising
50'046'799 amino acids abstracted from 109'694 references. This
represents an increase of 11% over release 41.0. The growth of the
database is summarized below.

      Release    Date   Number of   Number of
                         entries   amino acids
        2.0     09/86      3'939      900'163
        3.0     11/86      4'160      969'641
        4.0     04/87      4'387    1'036'010
        5.0     09/87      5'205    1'327'683
        6.0     01/88      6'102    1'653'982
        7.0     04/88      6'821    1'885'771
        8.0     08/88      7'724    2'224'465
        9.0     11/88      8'702    2'498'140
        10.0    03/89     10'008    2'952'613
        11.0    07/89     10'856    3'265'966
        12.0    10/89     12'305    3'797'482
        13.0    01/90     13'837    4'347'336
        14.0    04/90     15'409    4'914'264
        15.0    08/90     16'941    5'486'399
        16.0    11/90     18'364    5'986'949
        17.0    02/91     20'024    6'524'504
        18.0    05/91     20'772    6'792'034
        19.0    08/91     21'795    7'173'785
        20.0    11/91     22'654    7'500'130
        21.0    03/92     23'742    7'866'596
        22.0    05/92     25'044    8'375'696
        23.0    08/92     26'706    9'011'391
        24.0    12/92     28'154    9'545'427
        25.0    04/93     29'955   10'214'020
        26.0    07/93     31'808   10'875'091
        27.0    10/93     33'329   11'484'420
        28.0    02/94     36'000   12'496'420
        29.0    06/94     38'303   13'464'008
        30.0    10/94     40'292   14'147'368
        31.0    02/95     43'470   15'335'248
        32.0    11/95     49'340   17'385'503
        33.0    02/96     52'205   18'531'384
        34.0    10/96     59'021   21'210'389
        35.0    11/97     69'113   25'083'768
        36.0    07/98     74'019   26'840'295
        37.0    12/98     77'977   28'268'293
        38.0    07/99     80'000   29'085'965
        39.0    05/00     86'593   31'411'114
        40.0    10/01    101'602   37'315'215
        41.0    02/03    122'564   44'986'459
        42.0    10/03    135'850   50'046'799


3) STATUS OF THE MODEL ORGANISMS

We have selected a number of organisms that are the target of genome
sequencing and/or mapping projects and for which we intend to:

    * be as complete as possible. All sequences available at a given
      time should be immediately included in Swiss-Prot. This also
      includes sequence corrections and updates;
    * provide a higher level of annotation;
    * provide cross-references to specialized database(s) that contain,
      among other data, some information about the genes that code for
      these proteins;
    * provide specific indexes and documents.

From our efforts to annotate human sequence entries as completely as
possible arose the HPI project <http://www.expasy.org/sprot/hpi/>, and
the bacterial model organisms became the focus of the HAMAP project
<http://www.expasy.org/sprot/hamap/>. Here is the current status of the
model organisms which are not covered by these two projects:


      Organism        Database           Index file      Number of
                      cross-references                   sequences
      ------------    ----------------   --------------  ---------
      A.thaliana      None yet           arath.txt           2'294
      C.albicans      None yet           calbican.txt          272
      C.elegans       Wormpep            celegans.txt        2'405
      D.discoideum    DictyDB            dicty.txt             317
      D.melanogaster  FlyBase            fly.txt             1'907
      M.musculus      MGD                mgdtosp.txt         6'890
      S.cerevisiae    SGD                yeast.txt           4'920
      S.pombe         GeneDB_SPombe      pombe.txt           2'267


4) WE NEED YOUR HELP

We welcome feedback from our users. We would especially appreciate your
notifying us if you find that sequences belonging to your field of
expertise are missing from the database. We also would like to be
notified about annotations to be updated, if, for example, the function
of a protein has been clarified or if new information about
post-translational modifications has become available. To facilitate
this feedback we offer, on the ExPASy WWW server, a form that allows the
submission of updates and/or corrections to Swiss-Prot:

      http://www.expasy.org/sprot/update.html

It is also possible, from any entry in Swiss-Prot displayed by the
ExPASy server, to submit updates and/or corrections for that particular
entry. Finally, you can also send your comments by electronic mail to
the address:

      swiss-prot@expasy.org <mailto:swiss-prot@expasy.org>

Note that all update requests are assigned a unique identifier of the
form UR-Xnnnn (example: UR-A0123). This identifier is used internally by
the Swiss-Prot staff at SIB and EBI to track requests and is also used
in e-mail exchanges with the persons who have submitted a request.


5) SOME STATISTICS

  AMINO ACID COMPOSITION

   1.1  Composition in percent for the complete database

   Ala (A) 7.76   Gln (Q) 3.92   Leu (L) 9.60   Ser (S) 6.94
   Arg (R) 5.25   Glu (E) 6.55   Lys (K) 5.94   Thr (T) 5.49
   Asn (N) 4.25   Gly (G) 6.90   Met (M) 2.37   Trp (W) 1.18
   Asp (D) 5.29   His (H) 2.27   Phe (F) 4.05   Tyr (Y) 3.11
   Cys (C) 1.57   Ile (I) 5.90   Pro (P) 4.87   Val (V) 6.67

   Asx (B) 0.000  Glx (Z) 0.000  Xaa (X) 0.01

   Legend: gray = aliphatic, red = acidic, green = small hydroxy,
           blue = basic, black = aromatic, white = amide, yellow = sulfur


   1.2  Classification of the amino acids by their frequency

   Leu, Ala, Ser, Gly, Val, Glu, Lys, Ile, Thr, Asp, Arg, Pro, Asn, Phe,
   Gln, Tyr, Met, His, Cys, Trp


2.  TAXONOMIC ORIGIN

   Total number of species represented in this release of Swiss-Prot: 8294

   The first twenty species represent 55464 sequences:  40.8 % of the total
   number of entries.


   2.1 Table of the frequency of occurrence of species

        Species represented 1x: 4024
                            2x: 1258
                            3x:  656
                            4x:  417
                            5x:  269
                            6x:  257
                            7x:  195
                            8x:  153
                            9x:  131
                           10x:   74
                       11- 20x:  342
                       21- 50x:  246
                       51-100x:   90
                         >100x:  182


   2.2  Table of the most represented species

  ------  ---------  --------------------------------------------
  Number  Frequency  Species
  ------  ---------  --------------------------------------------
       1      10159  Homo sapiens (Human)
       2       6890  Mus musculus (Mouse)
       3       4920  Saccharomyces cerevisiae (Baker's yeast)
       4       4832  Escherichia coli
       5       3592  Rattus norvegicus (Rat)
       6       2653  Bacillus subtilis
       7       2405  Caenorhabditis elegans
       8       2294  Arabidopsis thaliana (Mouse-ear cress)
       9       2267  Schizosaccharomyces pombe (Fission yeast)
      10       1907  Drosophila melanogaster (Fruit fly)
      11       1773  Haemophilus influenzae
      12       1603  Escherichia coli O157:H7
      13       1591  Methanococcus jannaschii
      14       1425  Bos taurus (Bovine)
      15       1385  Mycobacterium tuberculosis
      16       1367  Salmonella typhimurium
      17       1234  Escherichia coli O6
      18       1083  Gallus gallus (Chicken)
      19       1082  Shigella flexneri
      20       1002  Mycobacterium bovis
      21        934  Synechocystis sp. (strain PCC 6803)
      22        933  Salmonella typhi
      23        929  Pseudomonas aeruginosa
      24        916  Archaeoglobus fulgidus
      25        865  Xenopus laevis (African clawed frog)
      26        831  Sus scrofa (Pig)
      27        746  Rhizobium meliloti (Sinorhizobium meliloti)
      28        730  Aquifex aeolicus
      29        714  Oryctolagus cuniculus (Rabbit)
      30        710  Vibrio cholerae
      31        687  Mycoplasma pneumoniae
      32        650  Yersinia pestis
      33        615  Pasteurella multocida
      34        600  Treponema pallidum
      35        600  Mycobacterium leprae
      36        578  Streptomyces coelicolor
      37        572  Buchnera aphidicola (subsp. Acyrthosiphon pisum) 
      38        560  Buchnera aphidicola (subsp. Schizaphis graminum)
      39        551  Helicobacter pylori (Campylobacter pylori)
      40        543  Bacillus halodurans
      41        541  Rickettsia prowazekii
      42        532  Helicobacter pylori J99 (Campylobacter pylori J99)
      43        522  Vibrio parahaemolyticus
      44        521  Methanobacterium thermoautotrophicum
      45        516  Anabaena sp. (strain PCC 7120)
      46        499  Zea mays (Maize)
      47        486  Mycoplasma genitalium
      48        473  Vibrio vulnificus
      49        463  Lactococcus lactis (subsp. lactis) (Streptococcus lactis)
      50        443  Neisseria meningitidis (serogroup B)
      51        440  Neisseria meningitidis (serogroup A)
      52        435  Thermotoga maritima
      53        432  Ralstonia solanacearum (Pseudomonas solanacearum)
      54        422  Oryza sativa (Rice)
      55        419  Rhizobium loti (Mesorhizobium loti)
      56        418  Agrobacterium tumefaciens (strain C58 / ATCC 33970)
      57        417  Listeria monocytogenes
      58        416  Caulobacter crescentus
      59        414  Chlamydia trachomatis
      60        411  Xanthomonas campestris (pv. campestris)
      61        411  Borrelia burgdorferi (Lyme disease spirochete)
      62        410  Listeria innocua
      63        407  Clostridium acetobutylicum
      64        403  Rhizobium sp. (strain NGR234)
      65        402  Canis familiaris (Dog)
      66        401  Chlamydia pneumoniae (Chlamydophila pneumoniae)
      67        398  Xylella fastidiosa
      68        392  Chlamydia muridarum
      69        391  Pyrococcus horikoshii
      70        389  Streptococcus pneumoniae
      71        387  Xylella fastidiosa (strain Temecula1 / ATCC 700964)
      72        384  Pyrococcus abyssi
      73        375  Xanthomonas axonopodis (pv. citri)
      74        374  Deinococcus radiodurans
      75        370  Staphylococcus aureus (strain N315)
      76        368  Staphylococcus aureus (strain Mu50 / ATCC 700699)
      77        353  Clostridium perfringens
      78        352  Nicotiana tabacum (Common tobacco)
      79        351  Campylobacter jejuni
      80        347  Staphylococcus aureus (strain MW2)
      81        347  Corynebacterium glutamicum (Brevibacterium flavum)
      82        346  Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081)
      83        341  Ovis aries (Sheep)
      84        332  Sulfolobus solfataricus
      85        329  Brucella melitensis
      86        329  Rickettsia conorii
      87        325  Pyrococcus furiosus
      88        317  Dictyostelium discoideum (Slime mold)
      89        317  Streptococcus pyogenes
      90        315  Thermoanaerobacter tengcongensis
      91        314  Methanosarcina mazei (Methanosarcina frisia)
      92        307  Aeropyrum pernix
      93        306  Neurospora crassa
      94        305  Methanosarcina acetivorans
      95        291  Pisum sativum (Garden pea)
      96        285  Staphylococcus aureus
      97        276  Chlorobium tepidum
      98        272  Candida albicans (Yeast)
      99        270  Streptococcus pyogenes (serotype M18)
     100        269  Bradyrhizobium japonicum


   2.3  Taxonomic distribution of the sequences

   Kingdom        sequences (% of the database)
    Archaea            7773 (  6%)
    Bacteria          54879 ( 40%)
    Eukaryota         64641 ( 48%)
    Viruses            8557 (  6%)

   Within Eukaryota:

    Category            sequences (% of Eukaryota) (% of the complete database)
     Human                  10159 ( 16%)           (  7%)
     Other Mammalia         17276 ( 27%)           ( 13%)
     Other Vertebrata        6106 (  9%)           (  4%)
     Viridiplantae          10227 ( 16%)           (  8%)
     Fungi                   9648 ( 15%)           (  7%)
     Insecta                 3568 (  6%)           (  3%)
     Nematoda                2633 (  4%)           (  2%)
     Other                   5024 (  8%)           (  4%)


3.  SEQUENCE SIZE

   Repartition of the sequences by size (excluding fragments)

               From   To  Number             From   To   Number
                  1-  50    2456             1001-1100     1205
                 51- 100    9273             1101-1200      849
                101- 150   13503             1201-1300      610
                151- 200   12518             1301-1400      413
                201- 250   12918             1401-1500      331
                251- 300   11315             1501-1600      236
                301- 350   11678             1601-1700      179
                351- 400   11033             1701-1800      132
                401- 450    8414             1801-1900      138
                451- 500    7190             1901-2000      120
                501- 550    5591             2001-2100       68
                551- 600    3670             2101-2200      103
                601- 650    3131             2201-2300      100
                651- 700    2227             2301-2400       58
                701- 750    1974             2401-2500       57
                751- 800    1649             >2500          362
                801- 850    1278
                851- 900    1280
                901- 950     901
                951-1000     794

   The average sequence length in Swiss-Prot is 368 amino acids.

   The shortest sequence is  LUXE_VIBFI (P24272):     3 amino acids.
   The longest sequence is   SNE1_HUMAN (Q8NF91):  8797 amino acids.


4.  JOURNAL CITATIONS

   Note: the following citation statistics reflect the number of distinct
         journal citations.

   Total number of journals cited in this release of Swiss-Prot: 1392


   4.1 Table of the frequency of journal citations

        Journals cited 1x:  511
                       2x:  186
                       3x:   97
                       4x:   66
                       5x:   49
                       6x:   35
                       7x:   31
                       8x:   27
                       9x:   20
                      10x:   14
                  11- 20x:  111
                  21- 50x:  104
                  51-100x:   40
                    >100x:  101


   4.2  List of the most cited journals in Swiss-Prot

   Nb    Citations   Journal name
   --    ---------   -------------------------------------------------------------
    1         9693   Journal of Biological Chemistry
    2         5221   Proceedings of the National Academy of Sciences of the U.S.A.
    3         3748   Journal of Bacteriology
    4         3667   Nucleic Acids Research
    5         3493   Gene
    6         2744   FEBS Letters
    7         2707   Biochemical and Biophysical Research Communications
    8         2489   Biochemistry
    9         2486   European Journal of Biochemistry
   10         2279   The EMBO Journal
   11         2143   Nature
   12         2093   Biochimica et Biophysica Acta
   13         1893   Journal of Molecular Biology
   14         1831   Genomics
   15         1668   Cell
   16         1633   Molecular and Cellular Biology
   17         1309   Biochemical Journal
   18         1232   Science
   19         1132   Molecular and General Genetics
   20         1131   Plant Molecular Biology
   21         1109   Molecular Microbiology
   22          874   Journal of Biochemistry
   23          851   Virology
   24          790   Human Molecular Genetics
   25          748   Journal of Cell Biology
   26          696   Nature Genetics
   27          651   Genes and Development
   28          628   Journal of Virology
   29          615   Plant Physiology
   30          604   Human Mutation
   31          597   Oncogene
   32          587   The American Journal of Human Genetics
   33          551   Infection and Immunity
   34          546   Journal of Immunology
   35          542   Yeast
   36          510   Journal of General Virology
   37          489   Archives of Biochemistry and Biophysics
   38          486   Structure
   39          466   FEMS Microbiology Letters
   40          458   Microbiology
   41          448   Development
   42          404   Nature Structural Biology
   43          399   Human Genetics
   44          397   Genetics
   45          391   Current Genetics
   46          362   Molecular and Biochemical Parasitology
   47          359   Blood
   48          335   Applied and Environmental Microbiology
   49          321   Journal of Clinical Investigation
   50          310   Molecular Endocrinology
   51          304   Mammalian Genome
   52          299   Developmental Biology
   53          297   Protein Science
   54          291   DNA and Cell Biology
   55          287   Immunogenetics
   56          286   Journal of Molecular Evolution
   57          271   Biological Chemistry Hoppe-Seyler
   58          270   Cancer Research
   59          263   Neuron
   60          263   Journal of Experimental Medicine
   61          254   Mechanisms of Development
   62          248   Molecular Biology of the Cell
   63          240   Acta Crystallographica, Section D
   64          238   The Plant Cell
   65          237   Endocrinology
   66          232   DNA Sequence
   67          231   Journal of General Microbiology
   68          228   Journal of Cell Science
   69          213   Hoppe-Seyler's Zeitschrift fur Physiologische Chemie
   70          211   The Plant Journal
   71          209   Molecular Biology and Evolution
   72          204   Brain Research. Molecular Brain Research
   73          202   Journal of Neuroscience
   74          202   Journal of Neurochemistry
   75          189   The Journal of Clinical Endocrinology and Metabolism
   76          177   Cytogenetics and Cell Genetics
   77          167   Comparative Biochemistry and Physiology
   78          163   Toxicon
   79          162   Bioscience, Biotechnology, and Biochemistry
   80          156   DNA
   81          153   Molecular Pharmacology
   82          151   American Journal of Physiology
   83          150   Antimicrobial Agents and Chemotherapy
   84          141   Current Biology
   85          140   Tissue Antigens
   86          135   Molecular Cell
   87          133   Biochimie
   88          132   Proteins
   89          132   Virus Research
   90          132   DNA Research
   91          130   Molecular Plant-Microbe Interactions
   92          127   Bioorganicheskaia Khimiia
   93          124   Journal of Investigative Dermatology
   94          124   Peptides
   95          120   Hemoglobin
   96          115   Molecular and Cellular Endocrinology
   97          115   Genome Research
   98          114   Agricultural and Biological Chemistry
   99          112   American Journal of Medical Genetics
  100          108   Journal of Medical Genetics
  101          102   European Journal of Immunology


5.  STATISTICS FOR SOME LINE TYPES

The following table summarizes the total number of some Swiss-Prot lines,
as well as the number of entries with at least one such line, and the
frequency of the lines.

                                   Total    Number of  Average
Line type / subtype                number   entries    per entry
---------------------------------  -------- ---------  ---------

References (RL)                     262333              1.93
   Journal                          228944    125635    1.69
   Submitted to EMBL/GenBank/DDBJ    30739     25552    0.23
   Unpublished observations            521       517   <0.01
   Submitted to Swiss-Prot             517       515   <0.01
   Plant Gene Register                 485       473   <0.01
   Book citation                       465       453   <0.01
   Thesis                              248       246   <0.01
   Submitted to other databases        198       197   <0.01
   Unpublished results                 122       120   <0.01
   Patent                               92        91   <0.01
   Worm Breeder's Gazette                2         2   <0.01

Comments (CC)                       463600              3.41
   SIMILARITY                       134388    116832    0.99
   FUNCTION                          85939     84536    0.63
   SUBCELLULAR LOCATION              63137     63137    0.46
   CATALYTIC ACTIVITY                45791     43051    0.34
   SUBUNIT                           39346     39346    0.29
   PATHWAY                           21282     20412    0.16
   TISSUE SPECIFICITY                15006     15006    0.11
   COFACTOR                          14929     14929    0.11
   MISCELLANEOUS                      8291      7646    0.06
   PTM                                8152      7401    0.06
   ALTERNATIVE PRODUCTS               4673      4673    0.03
   DOMAIN                             4127      3805    0.03
   CAUTION                            3947      3715    0.03
   INDUCTION                          3856      3856    0.03
   DEVELOPMENTAL STAGE                3667      3667    0.03
   DISEASE                            2401      1885    0.02
   ENZYME REGULATION                  1913      1913    0.01
   MASS SPECTROMETRY                  1021       918    0.01
   DATABASE                            884       812    0.01
   POLYMORPHISM                        435       426   <0.01
   ALLERGEN                            313       313   <0.01
   BIOTECHNOLOGY                        55        55   <0.01
   PHARMACEUTICAL                       47        47   <0.01

Features (FT)                       720924              5.31
   DOMAIN                           107190     32438    0.79
   TRANSMEM                          85992     18759    0.63
   CONFLICT                          52547     18442    0.39
   METAL                             49380     12298    0.36
   CARBOHYD                          48156     11914    0.35
   DISULFID                          43940     11664    0.32
   TURN                              39112      2952    0.29
   STRAND                            36250      2640    0.27
   ACT_SITE                          28670     17375    0.21
   HELIX                             27705      2842    0.20
   VARIANT                           26136      4877    0.19
   CHAIN                             25029     20292    0.18
   REPEAT                            24898      4114    0.18
   NP_BIND                           17064     12177    0.13
   SIGNAL                            15697     15695    0.12
   MOD_RES                           14364      8131    0.11
   NON_TER                           10462      7968    0.08
   BINDING                            8851      6875    0.07
   VARSPLIC                           8719      3948    0.06
   ZN_FING                            8643      3067    0.06
   SITE                               8594      5257    0.06
   INIT_MET                           5915      5873    0.04
   MUTAGEN                            5538      1665    0.04
   PROPEP                             4936      4178    0.04
   DNA_BIND                           4398      4139    0.03
   LIPID                              3812      2533    0.03
   PEPTIDE                            2714      1085    0.02
   TRANSIT                            2693      2670    0.02
   CA_BIND                            1799       764    0.01
   NON_CONS                            823       425    0.01
   CROSSLNK                            438       345   <0.01
   UNSURE                              304       128   <0.01
   SE_CYS                              155       101   <0.01

Cross-references (DR)              1236729              9.10
   EMBL                             260342    129417    1.92
   InterPro                         245720    120841    1.81
   Pfam                             156422    115928    1.15
   PROSITE                          117863     74642    0.87
   PIR                               86853     79511    0.64
   PRINTS                            45909     40532    0.34
   GO                                44199     13630    0.33
   SMART                             40856     30862    0.30
   HSSP                              38180     38180    0.28
   TIGRFAMs                          35999     33456    0.26
   ProDom                            34326     32956    0.25
   HAMAP                             32758     32659    0.24
   PDB                               19661      5456    0.14
   TIGR                              12981     12906    0.10
   Genew                              8961      8913    0.07
   MIM                                8833      7540    0.07
   MGD                                6547      6528    0.05
   SGD                                4964      4910    0.04
   GermOnline                         4924      4874    0.04
   EcoGene                            4228      4226    0.03
   MEROPS                             3434      3319    0.03
   TRANSFAC                           2629      2357    0.02
   WormPep                            2619      2383    0.02
   SubtiList                          2608      2607    0.02
   FlyBase                            2425      2351    0.02
   GeneDB_SPombe                      2282      2252    0.02
   TubercuList                        1414      1377    0.01
   StyGene                            1323      1320    0.01
   SWISS-2DPAGE                        949       948    0.01
   ListiList                           828       769    0.01
   PIRSF                               679       679   <0.01
   GK                                  671       671   <0.01
   Leproma                             604       600   <0.01
   Gramene                             415       413   <0.01
   MaizeDB                             411       406   <0.01
   HIV                                 370       354   <0.01
   REBASE                              358       353   <0.01
   ECO2DBASE                           351       299   <0.01
   DictyDb                             320       317   <0.01
   GlycoSuiteDB                        259       259   <0.01
   ZFIN                                245       245   <0.01
   PHCI-2DPAGE                         212       212   <0.01
   MypuList                            145       145   <0.01
   SagaList                            134       134   <0.01
   Aarhus/Ghent-2DPAGE                 128        98   <0.01
   Siena-2DPAGE                        103       103   <0.01
   HSC-2DPAGE                           85        85   <0.01
   PhosSite                             53        53   <0.01
   COMPLUYEAST-2DPAGE                   50        50   <0.01
   PMMA-2DPAGE                          47        47   <0.01
   Maize-2DPAGE                         39        39   <0.01
   ANU-2DPAGE                           13        13   <0.01


6.  MISCELLANEOUS STATISTICS

Total number of distinct authors cited in Swiss-Prot: 173952

Total number of entries encoded on a chloroplast: 3319
Total number of entries encoded on a mitochondrion: 2765
Total number of entries encoded on a cyanelle: 145
Total number of entries encoded on a plasmid: 2705

Number of fragments: 8096
Number of additional sequences encoded on splice variants: 6909


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