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TrEMBL release 1.0
Published October 2, 1996
First release of TREMBL, a protein sequence database supplementing the SWISS-PROT Protein Sequence Data Bank INTRODUCTION ============ TREMBL is a protein sequence database supplementing the SWISS-PROT Protein Sequence Data Bank. TREMBL contains the translations of all coding sequences (CDS) present in the EMBL Nucleotide Sequence Database not yet integrated in SWISS-PROT. TREMBL can be considered as a preliminary section of SWISS-PROT. For all TREMBL entries which should finally be upgraded to the standard SWISS-PROT quality, SWISS-PROT accession numbers have been assigned. FIRST RELEASE OF TREMBL ======================= This TREMBL release is created from the EMBL Nucleotide Sequence Database release 48 and contains 104'962 sequence entries, comprising 28'063'108 amino acids. TREMBL release 1 will be distributed with SWISS-PROT release 34. TREMBL is split in two main sections; SP-TREMBL and REM-TREMBL: SP-TREMBL (SWISS-PROT TREMBL) contains the entries (86'040) which should be incorporated into SWISS-PROT. SWISS-PROT accession numbers have been assigned for all SP-TREMBL entries. SP-TREMBL is organized in subsections: fun.dat (Fungi): 3367 entries hum.dat (Human): 4322 entries inv.dat (Invertebrates): 11920 entries mam.dat (Other Mammals): 1768 entries mhc.dat (MHC proteins): 2050 entries org.dat (Organelles): 6285 entries phg.dat (Bacteriophages): 866 entries pln.dat (Plants): 5524 entries pro.dat (Prokaryotes): 17222 entries rod.dat (Rodents): 4573 entries vrl.dat (Viruses): 26042 entries vrt.dat (Other Vertebrates): 2101 entries REM-TREMBL (REMaining TREMBL) contains the entries (19'255) that we do not want to include in SWISS-PROT. ACCESS/DATA DISTRIBUTION ======================== FTP server: ftp.ebi.ac.uk/pub/databases/trembl SRS server: http://www.ebi.ac.uk/srs/srsc TREMBL is also available on the SWISS-PROT CD-ROM. SP-TREMBL will be searchable on the FASTA and BLITZ servers of the EBI. TREMBL HAS BEEN PREPARED BY: ============================ Rolf Apweiler, Alain Gateau, Vivien Junker, Stephanie Kappus, Fiona Lang, Nicoletta Mitaritonna and Claire O'Donovan at the EMBL Outstation - European Bioinformatics Institute (EBI) in Hinxton, UK; Amos Bairoch at the Medical Biochemistry Department of the University of Geneva, Switzerland. ======================================================================= Rolf Apweiler | SWISS-PROT Coordinator EMBL Outstation | Email:firstname.lastname@example.org European Bioinformatics Institute (EBI) | URL: http://www.ebi.ac.uk Wellcome Trust Genome Campus, Hinxton | Tel: +44 (1223) 494435 Cambridge CB10 1SD, UK | Fax: +44 (1223) 494968 ========================================================================