Publications
How to cite us
The UniProt Consortium
Reorganizing the protein space at the Universal Protein Resource (UniProt)
Nucleic Acids Res. 40: D71-D75 (2012).
Publications on UniProt databases
Magrane M. and the UniProt consortium
UniProt Knowledgebase: a hub of integrated protein data
Database, 2011: bar009 (2011).
Jain E., Bairoch A., Duvaud S., Phan I., Redaschi N., Suzek B.E., Martin M.J., McGarvey P., Gasteiger E.
Infrastructure for the life sciences: design and implementation of the UniProt website
BMC Bioinformatics, 10:136 (2009).
Suzek B.E., Huang H., McGarvey P., Mazumder R., Wu C.H.
UniRef: Comprehensive and Non-Redundant UniProt Reference Clusters
Bioinformatics 23:1282-1288(2007).
Leinonen R., Nardone F., Zhu W., Apweiler R.
UniSave: the UniProtKB Sequence/Annotation Version database
Bioinformatics 22:1284-1285(2006).
Boeckmann B., Blatter M.-C., Famiglietti L., Hinz U., Lane L., Roechert B., Bairoch A.
Protein variety and functional diversity: Swiss-Prot annotation in its biological context
C. R. Biol. 328:882-899(2005).
Apweiler R., Bairoch A., Wu C.H.
Protein sequence databases
Curr. Opin. Chem. Biol. 8:76-80(2004).
Bairoch A., Boeckmann B., Ferro S., Gasteiger E.
Swiss-Prot: juggling between evolution and stability
Brief. Bioinform. 5:39-55(2004).
Leinonen R., Diez F.G., Binns D., Fleischmann W., Lopez R., Apweiler R.
UniProt Archive
Bioinformatics 20:3236-3237(2004).
Publications on annotation projects
Schneider M., Poux S., UniProt Consortium.
UniProtKB amid the turmoil of plant proteomics research
front
Front. Plant Sci. 3:270-270(2012)
Jungo F., Bougueleret L., Xenarios I., Poux S.
The UniProtKB/Swiss-Prot Tox-Prot program: A central hub of integrated venom protein data
Toxicon 60:551-557(2012).
Hinz U., UniProt Consortium.
From protein sequences to 3D-structures and beyond: the example of the UniProt knowledgebase
Cell. Mol. Life Sci. 67:1049-1064(2010).
Lima T., Auchincloss A.H., Coudert E., Keller G., Michoud K., Rivoire C., Bulliard V., de Castro E., Lachaize C., Baratin D., Phan I., Bougueleret L., Bairoch A.
HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot
Nucleic Acids Res. 37:D471-D478(2009).
Braconi Quintaje S., Orchard S.
The annotation of both human and mouse kinomes in UniProtKB/Swiss-Prot: one small step in manual annotation, one giant leap for full comprehension of genomes
Mol. Cell. Proteomics 7:1409-1419(2008).
Farriol-Mathis N., Garavelli J.S., Boeckmann B., Duvaud S., Gasteiger E., Gateau A., Veuthey A.-L., Bairoch A.
Annotation of post-translational modifications in the Swiss-Prot knowledgebase
Proteomics 4:1537-1550(2004).
Yip Y.L., Scheib H., Diemand A.V., Gattiker A., Famiglietti L.M., Gasteiger E., Bairoch A.
The Swiss-Prot variant page and the ModSNP database: a resource for sequence and structure information on human protein variants
Hum. Mutat. 23:464-470(2004).
Gattiker A., Michoud K., Rivoire C., Auchincloss A.H., Coudert E., Lima T., Kersey P., Pagni M., Sigrist C.J., Lachaize C., Veuthey A.-L., Gasteiger E., Bairoch A.
Automated annotation of microbial proteomes in Swiss-Prot
Comput. Biol. Chem. 27:49-58(2003).