Pacman protein - Drosophila melanogaster (Fruit fly)

Sequence

>tr|Q9XZU2|Q9XZU2_DROME Pacman protein OS=Drosophila melanogaster GN=pcm PE=2 SV=1 MGVPKFFRYISERYPCLSELAREHCIPEFDNLYLDMNGIVHNCSHPDDNNIHFHLEEEQI FQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRRFRTAREAEQQEAKAAQRGE LREHERFDSNCITPGTEFMVRLQEGLRAFLKTKISTDPLWQRCTVILSGQEAPGEGEHKI MDYIRYMKTQPDYDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRNVKRTSVEE TRFFLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISS NALPLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNNK SEAFDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYR NKFKRDPNDELIEELCHHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIEQVEI AFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFESDLNGKKHDW EAVVLIPFIDEGRLLAAMLPCEAQLSLEERERNRHGPMYVYKYSTVAQGPMPAYPPLRAL PVLYCTEVAKWSHEIAVNLPYSVCIELPNAARTVFFPGFPTMQHLPFDFELRNDRVKVFE QVSRNQNIVLKPRKRQLEDTLTAVASQYLGKVIHVGWPHLVKAIVVRVATRDQRVDSEGI TLNDSRRFDSECKALQEHFITRMGIQFANYDVLVYVRTFAGNSTEFRDKGALMVRDSWSS SVTGYPAQGVVADLTVWERMRKNFLNVEHYFPVGSTIFLITDPYYGSEGTVQDPRLAYTN GRIQVSIMVRPEPKVNAARQLQEERDRDYLSTFQVCNLLRISGRTLGRLSGTVWVVLGPR RQKMENVDQAQHWPAAQVSAAERGACRILLPHEQPVVLLQPGRGSDAQLLPALPRRYRLL WRLQRSRRVRIRTGRVPQCGWPSPRRGMANWVRQQPHMKVERISCGSKTVCRETIELLIA AVDELRSLPVKHVKLQVKPHLLIKPNVTLPDVYRSKRPVRLFDRVVIVRTIYMVPVGTKG TVIGIHPVTDPNPVRLECVHAVDTFCKVLFDSPVPNCNNIHGIAEDRVYKVPEIALVIIK TDEEGKKQNDCELPVRDPQPNQAQDEPVRATSSRYVTAAGSTSVPITMKTQISDEFVKTR SSPIARTDSYKPSSEPKPVPVPEQITNWRERVSTPTNKPQPAPNNWRINRSSSRQQGGSI FVAPPTKTPDAAASTASTAFTAASSATLTPLDQTLALMSVLGVGEDQSSPPLQEAVQQQR PPLLQQQRAPFPGQMPNLPKPPLFWQQEAQKQEALQQEAQQQEAQKKQQQAHAQMEPERI NSQHFYRSGQTGAALNQPPLGAPSKRQWHEWVHPRMQHANAFHAGVNNGYQMRPKKNIAA QSTFNNNVHMHLQQPYYPNQQQQQQQQQPLQLTEINNAPPRYSTIQDFVPIQAYRPKKLN RVQPAGRQDVDATKNPSRSPVLQQPTNETIDTKASSSLPVQSAGEQVIGLMQTLEIKQPA ASQSESDGVSTGSANAPTATTSSQAVNRRKHRVPRIGAKFDLEYILPDSPHPT

Blast tips

You can enter:
• a protein or nucleotide sequence
• a valid UniProt identifier, for example:
P00750 or A4_HUMAN or UPI0000000001
More...

Contribute

Unreviewed, UniProtKB/TrEMBL Q9XZU2 (Q9XZU2_DROME)

Last modified July 22, 2008. Version 24. History...

Clusters with 100%, 90%, 50% identity |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Pacman protein EMBL CAB43711.1

Gene names

Name:	pcm FlyBase FBgn0020261
Synonyms:	pacman EMBL CAB43711.1
ORF Names:	CG3291 FlyBase FBgn0020261

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome] EMBL CAB43711.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1613 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA interference Inferred from mutant phenotype. Source: FlyBase nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Inferred from mutant phenotype. Source: FlyBase
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q9XZU2-1 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: 6242DF05A3F33AC8
Show »

1,613

184,150

        10         20         30         40         50         60 
MGVPKFFRYI SERYPCLSEL AREHCIPEFD NLYLDMNGIV HNCSHPDDNN IHFHLEEEQI 

        70         80         90        100        110        120 
FQEIFNYVDK LFYLIKPQRL FFLSVDGVAP RAKMNQQRSR RFRTAREAEQ QEAKAAQRGE 

       130        140        150        160        170        180 
LREHERFDSN CITPGTEFMV RLQEGLRAFL KTKISTDPLW QRCTVILSGQ EAPGEGEHKI 

       190        200        210        220        230        240 
MDYIRYMKTQ PDYDPNTRHC LYGLDADLII LGLCTHELHF VVLREEVKFG RNVKRTSVEE 

       250        260        270        280        290        300 
TRFFLLHLGL LREYLELEFD ALRTDEHKLD IAQLIDDWVL MGFLVGNDFI PHLPCLHISS 

       310        320        330        340        350        360 
NALPLLYRTY IGIYPTLGGN INENGKLNLR RLQIFISALT EVELDHFKEH ADDLKYMNNK 

       370        380        390        400        410        420 
SEAFDMDVGE ITESQNLDSD LGALINKSML LYDDDSEEDC SDENAVLLKE FQNYKRNFYR 

       430        440        450        460        470        480 
NKFKRDPNDE LIEELCHHYV NALQWVLDYY YRGVQSWDWY YPFHYTPFIS DLKNIEQVEI 

       490        500        510        520        530        540 
AFHMGTPFLP FQQLLAVLPA ASAKLLPVAY HDLMLLPTSP LAEFYPLEFE SDLNGKKHDW 

       550        560        570        580        590        600 
EAVVLIPFID EGRLLAAMLP CEAQLSLEER ERNRHGPMYV YKYSTVAQGP MPAYPPLRAL 

       610        620        630        640        650        660 
PVLYCTEVAK WSHEIAVNLP YSVCIELPNA ARTVFFPGFP TMQHLPFDFE LRNDRVKVFE 

       670        680        690        700        710        720 
QVSRNQNIVL KPRKRQLEDT LTAVASQYLG KVIHVGWPHL VKAIVVRVAT RDQRVDSEGI 

       730        740        750        760        770        780 
TLNDSRRFDS ECKALQEHFI TRMGIQFANY DVLVYVRTFA GNSTEFRDKG ALMVRDSWSS 

       790        800        810        820        830        840 
SVTGYPAQGV VADLTVWERM RKNFLNVEHY FPVGSTIFLI TDPYYGSEGT VQDPRLAYTN 

       850        860        870        880        890        900 
GRIQVSIMVR PEPKVNAARQ LQEERDRDYL STFQVCNLLR ISGRTLGRLS GTVWVVLGPR 

       910        920        930        940        950        960 
RQKMENVDQA QHWPAAQVSA AERGACRILL PHEQPVVLLQ PGRGSDAQLL PALPRRYRLL 

       970        980        990       1000       1010       1020 
WRLQRSRRVR IRTGRVPQCG WPSPRRGMAN WVRQQPHMKV ERISCGSKTV CRETIELLIA 

      1030       1040       1050       1060       1070       1080 
AVDELRSLPV KHVKLQVKPH LLIKPNVTLP DVYRSKRPVR LFDRVVIVRT IYMVPVGTKG 

      1090       1100       1110       1120       1130       1140 
TVIGIHPVTD PNPVRLECVH AVDTFCKVLF DSPVPNCNNI HGIAEDRVYK VPEIALVIIK 

      1150       1160       1170       1180       1190       1200 
TDEEGKKQND CELPVRDPQP NQAQDEPVRA TSSRYVTAAG STSVPITMKT QISDEFVKTR 

      1210       1220       1230       1240       1250       1260 
SSPIARTDSY KPSSEPKPVP VPEQITNWRE RVSTPTNKPQ PAPNNWRINR SSSRQQGGSI 

      1270       1280       1290       1300       1310       1320 
FVAPPTKTPD AAASTASTAF TAASSATLTP LDQTLALMSV LGVGEDQSSP PLQEAVQQQR 

      1330       1340       1350       1360       1370       1380 
PPLLQQQRAP FPGQMPNLPK PPLFWQQEAQ KQEALQQEAQ QQEAQKKQQQ AHAQMEPERI 

      1390       1400       1410       1420       1430       1440 
NSQHFYRSGQ TGAALNQPPL GAPSKRQWHE WVHPRMQHAN AFHAGVNNGY QMRPKKNIAA 

      1450       1460       1470       1480       1490       1500 
QSTFNNNVHM HLQQPYYPNQ QQQQQQQQPL QLTEINNAPP RYSTIQDFVP IQAYRPKKLN 

      1510       1520       1530       1540       1550       1560 
RVQPAGRQDV DATKNPSRSP VLQQPTNETI DTKASSSLPV QSAGEQVIGL MQTLEIKQPA 

      1570       1580       1590       1600       1610 
ASQSESDGVS TGSANAPTAT TSSQAVNRRK HRVPRIGAKF DLEYILPDSP HPT

References

[1]	"Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster." Till D.D., Linz B., Seago J.E., Elgar S.J., Marujo P.E., Elias M.L., Arraiano C.M., McClellan J.A., McCarthy J.E., Newbury S.F. Mech. Dev. 79:51-55(1998) [PubMed: 10349620] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Newbury S.F. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
	AJ242529 mRNA. Translation: CAB43711.1.
3D structure databases
ModBase	Search...
Organism-specific databases
FlyBase	FBgn0020261. pcm.
Family and domain databases
InterPro	IPR016494. 5_3_exoribonuclease_1. IPR004859. Put_53exo. [Graphical view]
Pfam	PF03159. XRN_N. 1 hit. [Graphical view]
PIRSF	PIRSF006743. Exonuclease_Xnr1. 1 hit.
ProDom	Q9XZU2. [Graphical view] [Entries sharing at least one domain]

Entry information

Entry name

Q9XZU2_DROME

Accession

Primary (citable) accession number: Q9XZU2

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	July 22, 2008
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information