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Unreviewed, UniProtKB/TrEMBL Q9VRT9 (Q9VRT9_DROME)

Last modified November 4, 2008. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    CG13293-PA EMBL AAF50701.2
Gene names
ORF Names: CG13293 FlyBase FBgn0035677, Dmel_CG13293 EMBL AAF50701.2
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

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Protein attributes

Sequence length628 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

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Ontologies

Keywords

   Technical termComplete proteome

Gene Ontology (GO)

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

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Binary interactions

With

Entry

#Exp.

IntAct

Notes

Q9VCU81EBI-115325,EBI-139236
Q9VTH51EBI-115325,EBI-86076

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Sequences

Sequence LengthMass (Da)Tools
Q9VRT9-1 [UniParc].

Last modified October 1, 2002. Version 2.
Checksum: DC6417B189B44C2A

FASTA62871,839
        10         20         30         40         50         60 
MVKMESTEEQ DRKLVLEFCH LLEKSKQLFN GLRDLPQYGH RQWQAYFGRT FDVYTKLWKF 

        70         80         90        100        110        120 
QQQHRMVLDS KYGLKRWQIG EIASKIGQLY YHYYLRTSET NYLNEAYQFY AAIRGRAYYS 

       130        140        150        160        170        180 
RAAKEDRPDL MVKKLRYYAR FIVVCLLLKK MKLVRELVTE LEKQIQEYTN TYEPEDHLEW 

       190        200        210        220        230        240 
SLVLEEIKGF IKAEAAVAVL HADSNPIILS HSAPHSQFFC ESTGPAIRRR TSATTLTDVS 

       250        260        270        280        290        300 
SGSGSRLSPL TTPPCERSPH MTLSLQEILI VGSACEQAKF SELTMDMFRM LQTLEREPTE 

       310        320        330        340        350        360 
STTNPLSMAH GLHGHDASPA ASRIPPYGVP GSKGYMENGR AFRDNPHKYL LYKPSISQLL 

       370        380        390        400        410        420 
VFLASGSKEL PLGGALLLYM SADGCFSTTK HPEDFGYELG GLATSVKRDS VDGGGLSCRG 

       430        440        450        460        470        480 
KSYKENHCLY PGDLYPFTRR PMFVVIDSDN SFVFQHIPRY FGQPLVVLMS PQDVPPAFQA 

       490        500        510        520        530        540 
DVQHHGSLFT LFLHSPLTAL CYICNVGDVP IHHWERCQTY VDRFITEASR LVTRCRIDEI 

       550        560        570        580        590        600 
EQGIGFIDSS YVQFFGDDFL RTLILRFVFC DVVLRLHRGF RGRHMRPRCE PQLPANELLE 

       610        620 
HPSLSHIIFQ LASALDVRGH FSEGPECD

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References

[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.

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Cross-references

Sequence databases

AE014296 Genomic DNA. Translation: AAF50701.2.
RefSeqNP_648024.1.
UniGeneDm.23979

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ9VRT9.

Genome annotation databases

GeneID38695.
KEGGdme:Dmel_CG13293.
NMPDRfig|7227.3.peg.8488.

Organism-specific databases

FlyBaseFBgn0035677. CG13293.

Phylogenomic databases

HOGENOMQ9VRT9.

Gene expression databases

ArrayExpressQ9VRT9.

Family and domain databases

InterProIPR016607. UCP013022.
[Graphical view]
PIRSFPIRSF013022. UCP013022. 1 hit.

Other Resources

NextBio809921.

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Entry information

Entry nameQ9VRT9_DROME
AccessionPrimary (citable) accession number: Q9VRT9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: November 4, 2008
This is version 43 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information