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Unreviewed, UniProtKB/TrEMBL Q9VRA6 (Q9VRA6_DROME)

Last modified June 10, 2008. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesCG1412-PA EMBL AAF50897.2
Gene names
Name: RhoGAP19D EMBL AAF50897.2
ORF Names: Dmel_CG1412 EMBL AAF50897.2
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Contains 1 PDZ (DHR) domain. RuleBase RU003354V0

Contains 1 Rho-GAP domain. Spearmint SPM000198

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Ontologies

Keywords

   Technical termComplete proteome

Gene Ontology (GO)

   Biological processsignal transduction

Inferred from electronic annotation. Source: InterPro

   Cellular componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular functionprotein binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q9VRA6-1 [UniParc].

Last modified October 1, 2002. Version 2.
Checksum: AB833FCA94412D07

FASTA2,181229,767
        10         20         30         40         50         60 
MLQNSNGAAA AHSAASAVAT PAAAASAAAA AAAAAVAAAA NNAALAASSI QPKLIVIRRR 

        70         80         90        100        110        120 
PNQGFGFTLR HFIAYPPEDD QASSSASGLV SGSATAATAA SVSTNWPQEA SSAAGSNSGS 

       130        140        150        160        170        180 
SSSVGVAGIT GLEPTSPTSL PPYQVKAMET IFIKEVQANG PAHYANLQTG DRVLMVNNQP 

       190        200        210        220        230        240 
IAGIAYSTIV SMIKQTPAVL TLHVVPKECD VLQMHYTSIA HTPESNRLTM STHSPSLLAN 

       250        260        270        280        290        300 
GSHKTTFPAA AAVAAPPHQH QQQQQQLISY PAVAAVTTST PAGSPQSQSQ SQSHSHPNTH 

       310        320        330        340        350        360 
HAPSLHGGSR SGSITSTASG GITVLSQPFY PQQQQQQQQQ QQHRHPALTG GSSSIDFGDM 

       370        380        390        400        410        420 
AHGLRQHQQQ QQHLYQQQQQ HHQFMRANQP PNLTVLSASS ATNTPTPTAR QPKSATSHNQ 

       430        440        450        460        470        480 
ALYAVGAGPS SAAGSGSGSL SGGSENSDLM IRLRESIKQK EEFLKSPVPA SMSSASSING 

       490        500        510        520        530        540 
NQAQSSSPAQ QQHLQQHQQH FFPSHTPPGG VQVVVPPPRS RHQVMLKQQQ QQQQQHQQHH 

       550        560        570        580        590        600 
VLGYDMYHSG GKLVQRSSTA PGSVCHQHQQ QQQHHLYHQQ QHQQLQQTQH RQVMINNNAK 

       610        620        630        640        650        660 
YAKDLDYFET LQETGVTNKV FERKLVSHMS KGFDPFKPLS INTSALESSA STSSTSATTT 

       670        680        690        700        710        720 
VKKQSVLYES LQQHPLAKYH QTQQQTTTTT TVDGQTSSRM ELHKATLANA TIDPVPVGSS 

       730        740        750        760        770        780 
TAAIVDSASG SGNVVRRYKP LSSSSFDEGK PMRRISYLRA TNNETDFNAE AAAGGDAAAT 

       790        800        810        820        830        840 
GASGPASASA ASSAPGPTPS SAPAPAPAPA PLPISIPIPV AAVVEPQKTK SLVEEHPDPT 

       850        860        870        880        890        900 
YDVIGGTGGG HEFIETPNGL EDVRLSAHGS RRASMSSDMR SSIHIDAELN GKYVPNELEA 

       910        920        930        940        950        960 
FETEIEIKSS CINGKRMSEY RSWRQVKLEI KGDLLRIYSG RHAKSEHNVI ELDIRNFKFF 

       970        980        990       1000       1010       1020 
DESMDKKKYL IRMQSKPSPS GAHLASLGNE LNLDEGHDKL LTSSGSSSAN EPAANAASAL 

      1030       1040       1050       1060       1070       1080 
TASTSSSTCS SGPYTEILFK TKSSNEMKRL FGLLQWKDSL NYDDNEHQPQ GKQLAEPQKT 

      1090       1100       1110       1120       1130       1140 
VASASYLDDV QGGASAADSS PLSSHSGGIA DASGSHHVSA LPAAAAIVAA TSDSISPVMK 

      1150       1160       1170       1180       1190       1200 
ARKSSSHKHI PDKDLGSPKS KNWKDLLFRR GGSGSGGVSH HDLASPSACA AKQIGSIGVP 

      1210       1220       1230       1240       1250       1260 
LRSCPMSKVN AYVPHLVEVC TNIVETKGLG VVGIYRIPGN KAAISELSEL VNTKDFQFES 

      1270       1280       1290       1300       1310       1320 
CASDDRWEDV NVVSSLLKLF IRSLPDALMP ASYYINFIEA DKKFGLERIV LLREIVESLP 

      1330       1340       1350       1360       1370       1380 
RHPYETMKHL IRHLCRVSGN CDVNRMEPKN LAIIFGPSII RTPNDTLETA VKDMKHQCRI 

      1390       1400       1410       1420       1430       1440 
VELLVTQYDY FFEGGSLPDI AEVSGGTAAV SAAQPQQQTQ EDQTSMLLHN LSKIERITER 

      1450       1460       1470       1480       1490       1500 
ETTRTSRFMP QLRRKTHGKR SAVNSDTYSG ESVLVSGSSS NTTTTTTTTT HTTSSTSSSN 

      1510       1520       1530       1540       1550       1560 
TITTTISTTT IQQRRAQRKA VQSICDQALI LLLPTPVSSV SLPFQSLDYA KASASASASA 

      1570       1580       1590       1600       1610       1620 
SSTASTSSSS TLHSGGKASA SSSSSSTTKF SSSSSSACST TAVAISSSIS ATSSKLLSAN 

      1630       1640       1650       1660       1670       1680 
FKKRSTGGFL GSRSSHQTRK ASLDEKDSGQ SSGSLGHSLG VGINLAKEQQ RSSVDISILL 

      1690       1700       1710       1720       1730       1740 
TDDDSSSRLS DTGSMSLTTI TDTLDSKLRN LRSGSESNDE NGSPEFPKNR RHTLGQPLHM 

      1750       1760       1770       1780       1790       1800 
HSENIPYADE SPERLFHQFC NPLETAPLSL HLSRSCTATN TIGGDEKPSK QSGGVAPLPP 

      1810       1820       1830       1840       1850       1860 
SLLKAAHKLQ HSATVPIHQG SSTAPTSGAA TPVGTPTGSG GAGAIPSRSS SSSVTTLTKS 

      1870       1880       1890       1900       1910       1920 
IQPRFSNYLS YERGNAAAGG AERVVGSAGG AASDDDSEGS TTSDPKEKLL LGERPSPSFF 

      1930       1940       1950       1960       1970       1980 
IERYNKKRRD HRLFRSASFN CRNYSTRHIT AQTSGGVAAG VSGGVAGAVA VGVACCQALS 

      1990       2000       2010       2020       2030       2040 
TTGLTKDEKT DMNLTKKRQI QNKQNRSIKR RHTVGGPHDY SASNGGCSNH SHGHDLAAIN 

      2050       2060       2070       2080       2090       2100 
YNHHNRHHQQ QLLKLGSATS GGGGSGAAAA ETTTTTTTTT TVLRRLGTGQ AGAEASVALP 

      2110       2120       2130       2140       2150       2160 
ASSSGSSSNN NNSPQSDGSN GNGGGVAGVA SNAPPTGVGV GGNNSSGSSS NSSSTSTTPA 

      2170       2180 
GNGDQVLEVG IRIKNISRGR F

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References

[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

AE014298 Genomic DNA. Translation: AAF50897.2.
RefSeqNP_608396.2.
UniGeneDm.7998

3D structure databases

HSSPHSSP built from PDB template 1UEW based on UniProtKB Q86UL8.
ModBaseSearch...

Genome annotation databases

EnsemblCG1412. Drosophila melanogaster. [Contig view]
GeneID33048.
KEGGdme:Dmel_CG1412.
NMPDRfig%7C7227.3.peg.18799.

Organism-specific databases

FlyBaseFBgn0031118. RhoGAP19D.

Phylogenomic databases

HOGENOMQ9VRA6.

Gene expression databases

ArrayExpressQ9VRA6.

Family and domain databases

InterProIPR001478. PDZ.
IPR000198. RhoGAP.
[Graphical view]
Gene3DG3DSA:1.10.555.10. RhoGAP. 1 hit.
PfamPF00595. PDZ. 1 hit.
PF00620. RhoGAP. 1 hit.
[Graphical view]
SMARTSM00228. PDZ. 1 hit.
SM00324. RhoGAP. 1 hit.
[Graphical view]
PROSITEPS50106. PDZ. 1 hit.
PS50238. RHOGAP. 1 hit.
[Graphical view]
ProDomQ9VRA6.
[Graphical view] [Entries sharing at least one domain]

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Entry information

Entry nameQ9VRA6_DROME
AccessionPrimary (citable) accession number: Q9VRA6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: June 10, 2008
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information