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Unreviewed, UniProtKB/TrEMBL Q9VIM6 (Q9VIM6_DROME)

Last modified September 23, 2008. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    CG10949-PA (GH22016p) EMBL AAF53891.1
Gene names
ORF Names: CG10949 FlyBase FBgn0032858, Dmel_CG10949 EMBL AAF53891.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

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Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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Ontologies

Keywords

   Technical termComplete proteome

Gene Ontology (GO)

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q9VIM6-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 39314A5798E9B618

FASTA45953,176
        10         20         30         40         50         60 
MDDDELIKLI ERHPILYDKD CARSVKNAAQ KDAAWKAISQ KLGASERACI TRWKSIRDRF 

        70         80         90        100        110        120 
GKEFRRFQER PDEPTYWDMF PRLLFLKDHY KQGLARNESL DGMRFEPRER KKRTKVDMEQ 

       130        140        150        160        170        180 
ERRRKDEEEE DSQDDLLNEQ LIELVKSHPV LYDRHKIRVS KNLAAKNEAW REISENLNVS 

       190        200        210        220        230        240 
EELCYNRWKK LRDRFGREFR SHQINQSTPI TWRYFNDLLF LGRHFRKGVP LVLENIKRRG 

       250        260        270        280        290        300 
RPPKAGNPSG KTSKQPEGMV ISSGEQIWGA DYPYSTDNDD LEDDLELAYD EEIEILSEAE 

       310        320        330        340        350        360 
QATPYDFILS EATARQDLEP PQQLQVTTTT PATSEEIIHT IARVNPVVEE SSSLPGDSVP 

       370        380        390        400        410        420 
SAAISDKLLT TVIANMETVL QQSRELQAQI HHEQEQEREQ RSTQPANSLL AKAQMLLDGL 

       430        440        450 
SPSERASAER KIVQFLCQCQ IKALDGEEIE DVAPCQVIN

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References

« Hide 'large scale' references
[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL13670.1.

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Cross-references

Sequence databases

AE014134 Genomic DNA. Translation: AAF53891.1.
AY058441 mRNA. Translation: AAL13670.1.
RefSeqNP_610032.1.
UniGeneDm.4268

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ9VIM6.

Genome annotation databases

EnsemblCG10949. Drosophila melanogaster. [Contig view]
GeneID35310.
KEGGdme:Dmel_CG10949.

Organism-specific databases

FlyBaseFBgn0032858. CG10949.

Phylogenomic databases

HOGENOMQ9VIM6.

Gene expression databases

ArrayExpressQ9VIM6.

Family and domain databases

InterProIPR000637. AT_hook_DNA_bd.
IPR006578. MADF.
[Graphical view]
SMARTSM00384. AT_hook. 1 hit.
SM00595. MADF. 2 hits.
[Graphical view]
PROSITEPS51029. MADF. 2 hits.
[Graphical view]
ProDomQ9VIM6.
[Graphical view] [Entries sharing at least one domain]

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Entry information

Entry nameQ9VIM6_DROME
AccessionPrimary (citable) accession number: Q9VIM6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: September 23, 2008
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information