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Reviewed, UniProtKB/Swiss-Prot Q9VAW0 (OR98B_DROME)

Last modified April 8, 2008. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesPutative odorant receptor 98b
Gene names
Name: Or98b
ORF Names: CG1867
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora
Protein existenceEvidence at protein level.

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General annotation (Comments)

Function

Probable role in the odorant response, being an odorant receptor.

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the G-protein coupled receptor 6 family.

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Ontologies

Keywords

   Biological processOlfaction
Sensory transduction
   Cellular componentMembrane
   DomainTransmembrane
   Molecular functionG-protein coupled receptor
Receptor
Transducer
   Technical termComplete proteome

Gene Ontology (GO)

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical view

Molecule processing

Chain1 – 384384Putative odorant receptor 98b

Regions

Topological domain1 – 3434Extracellular Potential
Transmembrane35 – 55211 Potential
Topological domain56 – 6611Cytoplasmic Potential
Transmembrane67 – 87212 Potential
Topological domain88 – 12841Extracellular Potential
Transmembrane129 – 149213 Potential
Topological domain150 – 17728Cytoplasmic Potential
Transmembrane178 – 198214 Potential
Topological domain199 – 25860Extracellular Potential
Transmembrane259 – 279215 Potential
Topological domain280 – 2845Cytoplasmic Potential
Transmembrane285 – 305216 Potential
Topological domain306 – 32924Extracellular Potential
Transmembrane330 – 350217 Potential
Topological domain351 – 38434Cytoplasmic Potential

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Sequences

Sequence LengthMass (Da)Tools
Q9VAW0-1 [UniParc].

Last modified April 4, 2006. Version 3.
Checksum: B6C33492578994F0

FASTA38443,644
        10         20         30         40         50         60 
MLTDKFLRLQ SALFRLLGLE LLHEQDVGHR YPWRSICCIL SVASFMPLTI AFGLQNVQNV 

        70         80         90        100        110        120 
EQLTDSLCSV LVDLLALCKI GLFLWLYKDF KFLIGQFYCV LQTETHTAVA EMIVTRESRR 

       130        140        150        160        170        180 
DQFISAMYAY CFITAGLSAC LMSPLSMLIS YQRTGELQPK FPFPSVYPWD NMKLSNYIIS 

       190        200        210        220        230        240 
YFWNVCAALG VALPTVCVDT LFCSLSHNLC ALFQIARHKM MHFEGRNTKE THENLKHVFQ 

       250        260        270        280        290        300 
LYALCLNLGH FLNEYFRPLI CQFVAASLHL CVLCYQLSAN ILQPALLFYA AFTAAVVGQV 

       310        320        330        340        350        360 
SIYCFCGSSI HSECQLFGQA IYESSWPHLL QENLQLVSSL KIAMMRSSLG CPIDGYFFEA 

       370        380 
NRETLITVSK AFIKVSKKTP QVND

« Hide

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References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: GENOME REANNOTATION.

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Cross-references

Sequence databases

AE014297 Genomic DNA. Translation: AAF56788.3.
RefSeqNP_524540.3.
UniGeneDm.31287

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:22652N.
IntActQ9VAW0.

Protein family/group databases

GPCRDBSearch...

Genome annotation databases

GeneID43375.
KEGGdme:Dmel_CG1867.

Organism-specific databases

FlyBaseFBgn0039582. Or98b.

Enzyme and pathway databases

BioCycDMEL-XXX-02:DMEL-XXX-02-013823-MON.

Family and domain databases

InterProIPR004117. 7tm6_olfct_rcpt.
[Graphical view]
PANTHERPTHR21137. 7tm6_olfct_rcpt. 1 hit.
PfamPF02949. 7tm_6. 1 hit.
[Graphical view]
ProDomQ9VAW0.
[Graphical view] [Entries sharing at least one domain]
BLOCKSSearch...

Other Resources

ProtoNetSearch...

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Entry information

Entry nameOR98B_DROME
AccessionPrimary (citable) accession number: Q9VAW0
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: April 4, 2006
Last modified: April 8, 2008
This is version 57 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectDrosophila annotation project

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Relevant documents

Drosophila

Drosophila: entries, gene names and cross-references to FlyBase

SIMILARITY comments

Index of protein domains and families

Names and origin · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents