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Unreviewed, UniProtKB/TrEMBL Q8IGY7 (Q8IGY7_DROME)

Last modified April 29, 2008. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesRE04485p EMBL AAN71282.1
Also known as:
     CG6477-PB, isoform B
Gene names
Name: RhoGAP54D EMBL AAN71282.1 FlyBase FBgn0034249
ORF Names: CG6477 FlyBase FBgn0034249, Dmel_CG6477 EMBL AAS64816.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome] EMBL AAN71282.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Sequence similarities

Contains 1 Rho-GAP domain. Spearmint SPM000198

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Ontologies

Keywords

   Technical termComplete proteome

Gene Ontology (GO)

   Biological processsignal transduction

Inferred from electronic annotation. Source: InterPro

   Cellular componentintracellular

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q8IGY7-1 [UniParc].

Last modified March 1, 2003. Version 1.
Checksum: 4B02202D0781AC18

FASTA42448,128
        10         20         30         40         50         60 
MEATMDTDHA NLNDFRDRDL ATRMRRCNYE KYKSLVRMHL SFELELNTDE FDLPCHEIVY 

        70         80         90        100        110        120 
EDKGKLKKWN RLSKKHRLGH GAAATSCAAG SASKSVGNSP TETLQQQIDP GFLMHLQELK 

       130        140        150        160        170        180 
EFLMLEKNLT QEGLFRKAGA VSRQNELRMH IQHDKPLNLE LAGFSAHDCA TVFKGFLSEL 

       190        200        210        220        230        240 
PEPLLTDAHY PAHLQIAPLC QALNGQTTAT AERQQHLLNS VQLLLLLLPE EHRELLQHII 

       250        260        270        280        290        300 
EMLHAVAKHE KSNKMSADNL ATLFTPHLIC PRQLPPEVLH YQAKKMSSIV TYMIVRGLDI 

       310        320        330        340        350        360 
FEVPGKLSTD IRAYFLERKR KKTMSPEQTL DESISDVSTV NTVYTFVDRA ATAAATNTNN 

       370        380        390        400        410        420 
TDTELAQLYA HIQSMPESSK KRRLIKQFNK QNGQGKLLYI FNALMPFHSG SYDLNTSASN 


FKIT

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References

« Hide 'large scale' references
[1]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAN71282.1.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

BT001527 mRNA. Translation: AAN71282.1.
AE013599 Genomic DNA. Translation: AAS64816.1.
RefSeqNP_995878.1.
UniGeneDm.18592

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblCG6477. Drosophila melanogaster. [Contig view]
GeneID36996.
NMPDRfig%7C7227.3.peg.5994.

Organism-specific databases

FlyBaseFBgn0034249. RhoGAP54D.

Gene expression databases

ArrayExpressQ8IGY7.

Family and domain databases

InterProIPR000198. RhoGAP.
[Graphical view]
Gene3DG3DSA:1.10.555.10. RhoGAP. 1 hit.
PfamPF00620. RhoGAP. 1 hit.
[Graphical view]
SMARTSM00324. RhoGAP. 1 hit.
[Graphical view]
PROSITEPS50238. RHOGAP. 1 hit.
[Graphical view]
ProDomQ8IGY7.
[Graphical view] [Entries sharing at least one domain]

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Entry information

Entry nameQ8IGY7_DROME
AccessionPrimary (citable) accession number: Q8IGY7
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: April 29, 2008
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information