LD23703p (CG4299 protein) - Drosophila melanogaster (Fruit fly)

Contribute

Unreviewed, UniProtKB/TrEMBL Q540W9 (Q540W9_DROME)

Last modified November 4, 2008. Version 17. History...

Clusters with 100%, 90%, 50% identity |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
LD23703p (CG4299 protein) EMBL AAM50782.1

Gene names

Name:	Set EMBL AAM50782.1 FlyBase FBgn0014879
Synonyms:	CG4299 EMBL CAL26311.1

Organism

Drosophila melanogaster (Fruit fly) EMBL AAM50782.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	269 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the nucleosome assembly protein (NAP) family. RuleBase RU003876V0

Ontologies

Gene Ontology (GO)
Biological process	nucleosome assembly Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q540W9-1 [UniParc].

Last modified May 24, 2005. Version 1.
Checksum: 05F88CB85933BB09
Show »

269

30,995

        10         20         30         40         50         60 
MSSVPKRAKL DGAPADGNTS AAAGNNEEES EALEQIDACQ NEIDALNEKA SEEILKVEQK 

        70         80         90        100        110        120 
YNKLRKPCYE KRSELVKRIP NFWVTSFINH PQVSGILDEE EEECLHALNK LEVEEFEDIK 

       130        140        150        160        170        180 
SGYRINFHFD ENPYFENKVL TKEFHLNSAA ASENGDWPAS TSTPIKWKEG KNLLKLLLTK 

       190        200        210        220        230        240 
PYGNKKKRNS EYKTFFDWFS DNTDPVNDEI AELIKDDLWP NPLQYYLVPD IEVEPEDEED 

       250        260 
NEDNDEEAFD DEDGEDGEGE EEEEDEDDK

References

[1]	Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. Celniker S. Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley EMBL AAM50782.1.
[2]	"Widespread adaptive evolution of Drosophila genes with sex-biased expression." Proeschel M., Zhang Z., Parsch J. Genetics 174:893-900(2006) [PubMed: 16951084] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ZBMEL82 EMBL CAL26311.1, ZBMEL84 EMBL CAL26312.1, ZBMEL95 EMBL CAL26313.1, ZBMEL131 EMBL CAL26314.1, ZBMEL157 EMBL CAL26315.1, ZBMEL186 EMBL CAL26316.1, ZBMEL191 EMBL CAL26317.1, ZBMEL229 EMBL CAL26318.1, ZBMEL377 EMBL CAL26319.1 and ZBMEL398 EMBL CAL26320.1.
[3]	"Widespread adaptive evolution of Drosophila genes with sex-biased expression." Proeschel M., Zhang Z., Parsch J. Genetics 0:0-0 Cited for: NUCLEOTIDE SEQUENCE. Strain: ZBMEL82 EMBL CAL26311.1, ZBMEL84 EMBL CAL26312.1, ZBMEL95 EMBL CAL26313.1, ZBMEL131 EMBL CAL26314.1, ZBMEL157 EMBL CAL26315.1, ZBMEL186 EMBL CAL26316.1, ZBMEL191 EMBL CAL26317.1, ZBMEL229 EMBL CAL26318.1, ZBMEL377 EMBL CAL26319.1 and ZBMEL398 EMBL CAL26320.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
	AY118922 mRNA. Translation: AAM50782.1. AM294381 Genomic DNA. Translation: CAL26311.1. AM294382 Genomic DNA. Translation: CAL26312.1. AM294383 Genomic DNA. Translation: CAL26313.1. AM294384 Genomic DNA. Translation: CAL26314.1. AM294385 Genomic DNA. Translation: CAL26315.1. AM294386 Genomic DNA. Translation: CAL26316.1. AM294387 Genomic DNA. Translation: CAL26317.1. AM294388 Genomic DNA. Translation: CAL26318.1. AM294389 Genomic DNA. Translation: CAL26319.1. AM294390 Genomic DNA. Translation: CAL26320.1.
RefSeq	NP_650438.2.
UniGene	Dm.7187
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	41844.
KEGG	dme:Dmel_CG4299.
NMPDR	fig\|7227.3.peg.12928.
Organism-specific databases
FlyBase	FBgn0014879. Set.
Gene expression databases
ArrayExpress	Q540W9.
Family and domain databases
InterPro	IPR002164. NAP_family. [Graphical view]
PANTHER	PTHR11875. NAP_family. 1 hit.
Pfam	PF00956. NAP. 1 hit. [Graphical view]
Other Resources
NextBio	825857.

Entry information

Entry name

Q540W9_DROME

Accession

Primary (citable) accession number: Q540W9

Entry history

Integrated into UniProtKB/TrEMBL:	May 24, 2005
Last sequence update:	May 24, 2005
Last modified:	November 4, 2008
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information