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Unreviewed, UniProtKB/TrEMBL Q494K2 (Q494K2_DROME)

Last modified November 4, 2008. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    LD47422p (CG13350-PA) EMBL AAZ41782.1
Gene names
ORF Names: CG13350 EMBL AAZ41782.1 FlyBase FBgn0033890, Dmel_CG13350 EMBL AAF58306.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome] EMBL AAZ41782.1
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

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Protein attributes

Sequence length895 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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Ontologies

Keywords

   DomainRepeat RuleBase RU003532V3
WD repeat RuleBase RU000362V4
   Technical termComplete proteome

Gene Ontology (GO)

None. [Check GOA]

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Sequences

Sequence LengthMass (Da)Tools
Q494K2-1 [UniParc].

Last modified October 3, 2006. Version 1.
Checksum: DEBA31F8C1664B22

FASTA89596,647
        10         20         30         40         50         60 
MSFLRSALRY AHTNGYTGLL YTPRGEFIIT CGTDGDIRHW TCISDDDPRS SCLGEFVMCI 

        70         80         90        100        110        120 
AHTGTRLLAS TDRNTIHAYT FPEMDSDGIL MRFTAPATCL KVSGGYTAAG SEDTTIKVLK 

       130        140        150        160        170        180 
GDTAGNETVL EGHTGPILAL DLFAERKLLV SVAGDGQLKV WNFEEGKELK TIGGLPKVNS 

       190        200        210        220        230        240 
FESASLYGTP HFEPQSGELL AYAVDNEIVV LNTANWEVAF KLRDDSVSSN YSCCQFSPNG 

       250        260        270        280        290        300 
ERLAAGTTKG EVSIFDVKKR KAVTVEIPPS DCNAITCLAW NLSGEVEVAF CDATGQLGTV 

       310        320        330        340        350        360 
FLGDAVDTGN GDGLVDDQAE LLGDDYEFEA GDDVDTAADD GDGVSLEQLK RKVMNFADPV 

       370        380        390        400        410        420 
DHDDASNQSL DSSSRTVPAP VAPQIKLFKQ QTAFQPSATP ADLEHRYMAW NDVGIVTAHV 

       430        440        450        460        470        480 
EPSGDSSIDV EFHDASIHHA LHISNYNQHN LASVSSGALA LASNESSKLV VIALAAAGNK 

       490        500        510        520        530        540 
EWSLSLPDCE SAEAVVATRF LVAVATSSSF LRIFTVMGTQ REVLTIPGPM VAIAGHEHSL 

       550        560        570        580        590        600 
MVVYHSSAPS QTQQHLAAML VNINGLSLRQ EYLPVPLTPG RQLTWFGYSD TGSPSIADNM 

       610        620        630        640        650        660 
GLLQLYRRSS NAWFPICDTM KQSTSVSHNF FVVAVSEKRQ IVQAVLCRGT SYPMTNPRPM 

       670        680        690        700        710        720 
LQELRMQIPL CDVEVEKSEL EDALLRSSLM QMDGAEKMQK ETAIKLFALA CSSECETRAR 

       730        740        750        760        770        780 
ELIESIACTD LLQLAVKYAT KRGRIHLSDR LCELLPQLEA VQEARKQQTL LGASGIAATI 

       790        800        810        820        830        840 
VLPMTPTSAS QSGPKPKAIE LSSAKRGTLK RLVNSPNMFK AAAASAASRP STPDITPSPL 

       850        860        870        880        890 
DTQENIFGES ESEVPMGKAT DHRSPLNSVN PFAMKRKLGD TGVIFGSEKL KLAKK

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References

« Hide 'large scale' references
[1]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Celniker S.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAZ41782.1.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.

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Cross-references

Sequence databases

AE013599 Genomic DNA. Translation: AAF58306.1.
BT023774 mRNA. Translation: AAZ41782.1.
RefSeqNP_610921.1.
UniGeneDm.611

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID36551.
KEGGdme:Dmel_CG13350.
NMPDRfig|7227.3.peg.5152.

Organism-specific databases

FlyBaseFBgn0033890. CG13350.

Family and domain databases

InterProIPR015943. WD40/YVTN_repeat-like.
IPR001680. WD40_repeat.
[Graphical view]
Gene3DG3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
PfamPF00400. WD40. 2 hits.
[Graphical view]
SMARTSM00320. WD40. 4 hits.
[Graphical view]
PROSITEPS00678. WD_REPEATS_1. 1 hit. Uncertain.
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Other Resources

NextBio799165.

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Entry information

Entry nameQ494K2_DROME
AccessionPrimary (citable) accession number: Q494K2
Entry history
Integrated into UniProtKB/TrEMBL: October 3, 2006
Last sequence update: October 3, 2006
Last modified: November 4, 2008
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information