CG8896 - Drosophila melanogaster (Fruit fly)

Sequence

>tr|Q2XXS4|Q2XXS4_DROME CG8896 (Fragment) OS=Drosophila melanogaster GN=18w PE=2 SV=1 ITIIAVAACLLLLVADAHAQQQCNWQYGLTTMDIRCSVRALESGTGTPLDLQVAEAAGRL DLQCSQELLHASELAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAV WGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFL GFSEKLCAGSALSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNI STLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLE QLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNN SIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRN CSDLKELDLSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNR IGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDINGIFATLA SLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVTTLDASHNRIT EIGAMSVPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSA EKPVPEFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLRPLAS LSASDFVCKYESHCPPTCHCCEYEQCECEVICPGNCSCFHDATWATNIVDCGRQDLAALP NRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHL ENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQ YRHSLQGLTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNLA NGPDCSDLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLFA HYGVRVCEPRFEDAGKLYDAIILHSEKDYEFVCRNIAAELEHGRPPFRLCIQQRDLPPQA SHLQLVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVIIEETSVSAEA EDVAELSPYLKSVPSNRLLTCDRYFWEKLRYAIPIELSPRGNNYTLDHHERFKQPVSPGM IFRQAPPPPAYYCTEEMEANYSSATTATPSPRPTRPGGAARIVDSMPMPMRPPSEHIYHS IESEYSAYDQHEALSMIPTGLMHQHQQQQLRLHQQQQQQQQQRLLQPQFRAMPQQAIPAP SAPVHLRSGSGLSQASTSTQSTAQASTSAAAAQQQQQQQQQQQQAAGSEAANKN

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Unreviewed, UniProtKB/TrEMBL Q2XXS4 (Q2XXS4_DROME)

Last modified October 14, 2008. Version 21. History...

Clusters with 100%, 90%, 50% identity |

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
CG8896 EMBL ABA86544.1

Gene names

Name:

18w FlyBase FBgn0004364

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome] EMBL ABA86544.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1374 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 TIR domain. Spearmint SPM004075

Ontologies

Keywords
Domain	Leucine-rich repeat Spearmint SPM003591 Repeat Spearmint SPM003591
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	antibacterial humoral response Inferred from mutant phenotype. Source: FlyBase cell adhesion Inferred from direct assay. Source: FlyBase embryonic morphogenesis Traceable author statement. Source: FlyBase
Cellular component	cytoplasm Inferred from direct assay. Source: FlyBase membrane fraction Inferred from direct assay. Source: FlyBase plasma membrane Inferred from direct assay. Source: FlyBase
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL ABA86544.1

Non-terminal residue

1

EMBL ABA86544.1

Sequences

Sequence

Length

Mass (Da)

Tools

Q2XXS4-1 [UniParc].

Last modified December 20, 2005. Version 1.
Checksum: E3FEFE76CE37245C
Show »

1,374

153,772

        10         20         30         40         50         60 
ITIIAVAACL LLLVADAHAQ QQCNWQYGLT TMDIRCSVRA LESGTGTPLD LQVAEAAGRL 

        70         80         90        100        110        120 
DLQCSQELLH ASELAPGLFR QLQKLSELRI DACKLQRVPP NAFEGLMSLK RLTLESHNAV 

       130        140        150        160        170        180 
WGPGKTLELH GQSFQGLKEL SELHLGDNNI RQLPEGVWCS MPSLQLLNLT QNRIRSAEFL 

       190        200        210        220        230        240 
GFSEKLCAGS ALSNANGAVS GGSELQTLDV SFNELRSLPD AWGASRLRRL QTLSLQHNNI 

       250        260        270        280        290        300 
STLAPNALAG LSSLRVLNIS YNHLVSLPSE AFAGNKELRE LHLQGNDLYE LPKGLLHRLE 

       310        320        330        340        350        360 
QLLVLDLSGN QLTSHHVDNS TFAGLIRLIV LNLSNNALTR IGSKTFKELY FLQILDMRNN 

       370        380        390        400        410        420 
SIGHIEEGAF LPLYNLHTLN LAENRLHTLD NRIFNGLYVL TKLTLNNNLV SIVESQAFRN 

       430        440        450        460        470        480 
CSDLKELDLS SNQLTEVPEA VQDLSMLKTL DLGENQISEF KNNTFRNLNQ LTGLRLIDNR 

       490        500        510        520        530        540 
IGNITVGMFQ DLPRLSVLNL AKNRIQSIER GAFDKNTEIE AIRLDKNFLT DINGIFATLA 

       550        560        570        580        590        600 
SLLWLNLSEN HLVWFDYAFI PSNLKWLDIH GNYIEALGNY YKLQEEIRVT TLDASHNRIT 

       610        620        630        640        650        660 
EIGAMSVPNS IELLFINNNI IGQIQANTFV DKTRLARVDL YANVLSKISL NALRVAPVSA 

       670        680        690        700        710        720 
EKPVPEFYLG GNPFECDCSM EWLQRINNLT TRQHPHVVDL GNIECLMPHS RSAPLRPLAS 

       730        740        750        760        770        780 
LSASDFVCKY ESHCPPTCHC CEYEQCECEV ICPGNCSCFH DATWATNIVD CGRQDLAALP 

       790        800        810        820        830        840 
NRIPQDVSDL YLDGNNMPEL EVGHLTGRRN LRALYLNASN LMTLQNGSLA QLVNLRVLHL 

       850        860        870        880        890        900 
ENNKLTALEG TEFRSLGLLR ELYLHNNMLT HISNATFEPL VSLEVLRLDN NRLSSLPHLQ 

       910        920        930        940        950        960 
YRHSLQGLTL GRNAWSCRCQ QLRELAQFVS DNAMVVRDAH DIYCLDAGIK RELELIGNLA 

       970        980        990       1000       1010       1020 
NGPDCSDLLD ASASNISSSQ DLAGGYRLPL LAAVLVLIFL VVVLIIVFVF RESVRMWLFA 

      1030       1040       1050       1060       1070       1080 
HYGVRVCEPR FEDAGKLYDA IILHSEKDYE FVCRNIAAEL EHGRPPFRLC IQQRDLPPQA 

      1090       1100       1110       1120       1130       1140 
SHLQLVEGAR ASRKIILVLT RNLLATEWNR IEFRNAFHES LRGLAQKLVI IEETSVSAEA 

      1150       1160       1170       1180       1190       1200 
EDVAELSPYL KSVPSNRLLT CDRYFWEKLR YAIPIELSPR GNNYTLDHHE RFKQPVSPGM 

      1210       1220       1230       1240       1250       1260 
IFRQAPPPPA YYCTEEMEAN YSSATTATPS PRPTRPGGAA RIVDSMPMPM RPPSEHIYHS 

      1270       1280       1290       1300       1310       1320 
IESEYSAYDQ HEALSMIPTG LMHQHQQQQL RLHQQQQQQQ QQRLLQPQFR AMPQQAIPAP 

      1330       1340       1350       1360       1370 
SAPVHLRSGS GLSQASTSTQ STAQASTSAA AAQQQQQQQQ QQQQAAGSEA ANKN

References

[1]	"Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila." Comeron J.M., Guthrie T.B. Mol. Biol. Evol. 22:2519-2530(2005) [PubMed: 16120803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Ral1 EMBL ABA86544.1.

Cross-references

Sequence databases
	DQ138938 Genomic DNA. Translation: ABA86544.1.
3D structure databases
ModBase	Search...
Organism-specific databases
FlyBase	FBgn0004364. 18w.
Gene expression databases
ArrayExpress	Q2XXS4.
Family and domain databases
InterPro	IPR004075. IL1_rcpt_1. IPR001611. LRR. IPR000483. LRR_C. IPR000372. LRR_cys_N. IPR003591. LRR_sub-typ. IPR000157. TIR. [Graphical view]
Pfam	PF00560. LRR_1. 18 hits. PF01582. TIR. 1 hit. [Graphical view]
PRINTS	PR01537. INTRLKN1R1F. PR00019. LEURICHRPT.
SMART	SM00369. LRR_TYP. 9 hits. SM00082. LRRCT. 1 hit. SM00013. LRRNT. 1 hit. SM00255. TIR. 1 hit. [Graphical view]
PROSITE	PS50104. TIR. 1 hit. [Graphical view]

Entry information

Entry name

Q2XXS4_DROME

Accession

Primary (citable) accession number: Q2XXS4

Entry history

Integrated into UniProtKB/TrEMBL:	December 20, 2005
Last sequence update:	December 20, 2005
Last modified:	October 14, 2008
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information