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Unreviewed, UniProtKB/TrEMBL Q2JSR7 (Q2JSR7_SYNJA)

Last modified September 2, 2008. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Response regulator EMBL ABD00302.1
Gene names
Ordered Locus Names: CYA_2162
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

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Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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Sequences

Sequence LengthMass (Da)Tools
Q2JSR7-1 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 018E365F8D66E00B

FASTA41446,468
        10         20         30         40         50         60 
MNCPPVCTEV SAHLLNAEVS FTGVVRYFSA LDKGEGLGTW SLVFHQGRLG FAHHSLEPLE 

        70         80         90        100        110        120 
RLDRHLRRLS HQVFSLTRQN CLRIHRQVEA LLAQETGPLP ADLLGLSWMV TEQLLPWEAA 

       130        140        150        160        170        180 
RRLNAWIGEE VLQNLLLVPG GFQQEIIPLD NVPTLGQWDG GSLLDLIQKR LRAWQSLGPE 

       190        200        210        220        230        240 
ITSPYQRPYF ASRAQAERLP AEQQERLGRL LKGFSFRQLS ALLDQDDLQI ARRLHPLVKA 

       250        260        270        280        290        300 
GILVLRDPQP PFDRLPKTYS AKLETESQPS ETPTVPLHLA NELADLGPSP QASKTWIVAC 

       310        320        330        340        350        360 
IDDSEAMLSE LQRLLEGHNL VIHAISDSLK ALMKLTTLKP DLILLDVGMP NVDGYQLCSL 

       370        380        390        400        410 
IRKSSVLKDV PVVMVTGHKG LIDRVKARLA GATDYLTKPF RQEELLQMVF RYLS

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000239 Genomic DNA. Translation: ABD00302.1.
RefSeqYP_475565.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3899073.
GenomeReviewsGene locus CYA_2162 in contig CP000239_GR.
KEGGcya:CYA_2162.
TIGRCYA_2162.

Phylogenomic databases

HOGENOMQ2JSR7.

Family and domain databases

InterProIPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
[Graphical view]
ProDomPD000039. Response_reg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00448. REC. 1 hit.
[Graphical view]
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

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Entry information

Entry nameQ2JSR7_SYNJA
AccessionPrimary (citable) accession number: Q2JSR7
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 2, 2008
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information