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Unreviewed, UniProtKB/TrEMBL Q2JSB9 (Q2JSB9_SYNJA)

Last modified September 23, 2008. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Response regulator EMBL ABD00463.1
Gene names
Ordered Locus Names: CYA_2336
OrganismSynechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone A-Prime) [Complete proteome] [HAMAP]
Taxonomic identifier321327 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

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Protein attributes

Sequence length344 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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Sequences

Sequence LengthMass (Da)Tools
Q2JSB9-1 [UniParc].

Last modified March 7, 2006. Version 1.
Checksum: 96B8CB382537C98C

FASTA34438,857
        10         20         30         40         50         60 
MQSAQAERPV RVGIPEIAPF GEQEPAGHLL IVDDQPHSRL LLGDLLESIG YRVSEAENGQ 

        70         80         90        100        110        120 
QALQMLPSLQ PDLVLLDVMM PGLDGFEVCR RIKADEETRL IPVVLIAAAS DRKNRLRGIE 

       130        140        150        160        170        180 
AGADDFLSKP FDESELLARV RSLVRQKHLN EDLDHAAQVL FAIARSVESR DPTTGDHCER 

       190        200        210        220        230        240 
LAALAKSFGE FLQLPRPLIK VLAWGGYLHD IGKVGIPDAI LGKTGKHTPE EWEVMKSHVL 

       250        260        270        280        290        300 
IGEEICRPLR TMRDVLPLIR HHHERWDGSG YPDGLKGEAI PLVARVFQIV DIYDALTSER 

       310        320        330        340 
PYKRAFTVQE AMDILRQETT KGWRDPYLVE RFFEFLRSRL PHLE

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References

[1]"Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses."
Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N., Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.
ISME J. 1:703-713(2007) [PubMed: 18059494] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000239 Genomic DNA. Translation: ABD00463.1.
RefSeqYP_475726.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3897548.
GenomeReviewsGene locus CYA_2336 in contig CP000239_GR.
KEGGcya:CYA_2336.
TIGRCYA_2336.

Phylogenomic databases

HOGENOMQ2JSB9.

Family and domain databases

InterProIPR003607. Met-dep_phosphohydro_HD.
IPR006674. Met-dep_phosphohydro_HD_sub.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR006675. Unchar_HDIG.
[Graphical view]
PfamPF01966. HD. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
ProDomPD000039. Response_reg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00471. HDc. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
TIGRFAMsTIGR00277. HDIG. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

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Entry information

Entry nameQ2JSB9_SYNJA
AccessionPrimary (citable) accession number: Q2JSB9
Entry history
Integrated into UniProtKB/TrEMBL: March 7, 2006
Last sequence update: March 7, 2006
Last modified: September 23, 2008
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information