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Unreviewed, UniProtKB/TrEMBL Q24090 (Q24090_DROME)

Last modified November 4, 2008. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    CG1064-PA (SNR1) (GH08712p) EMBL AAF52024.1
Gene names
Name: Snr1 EMBL AAF52024.1 FlyBase FBgn0011715
ORF Names: CG1064 FlyBase FBgn0011715, Dmel_CG1064 EMBL AAF52024.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

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Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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Sequences

Sequence LengthMass (Da)Tools
Q24090-1 [UniParc].

Last modified January 1, 1999. Version 2.
Checksum: C6154768FCEA997D

FASTA37041,911
        10         20         30         40         50         60 
MALQTYGDKP VAFQLEEGGE YYYVGSEVGN YMRHFRGILY KKYPGMTRIV LSNEERKRLA 

        70         80         90        100        110        120 
ESGLSSHILA SSVSLLRAVE VDDIMAGNDE KYRAVSVNTS DTPVPRESKS KKQPQYVPTM 

       130        140        150        160        170        180 
PNSSHLDAVP QATPINRNRV HTKKVRTFPM CFDDTDPTAS LENAAQKECL VPIRLDMELE 

       190        200        210        220        230        240 
GQKLRDTFTW NKNESMITPE QFAEVLCDDL DLNPLPFVPA IAQAIRQQIE AFPNDPPILE 

       250        260        270        280        290        300 
ETCDQRVIVK LNIHVGNTSL VDQVEWDMSE KNNNPEEFAI KLCAELGLGG EFVTAIAYSI 

       310        320        330        340        350        360 
RGQLSWHCRT YAFSEAPLST IDVPFRNPSD ADAWAPFLET LTDAEMEKKI RDQDRNTRRM 

       370 
RRLANTTTGW

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References

« Hide 'large scale' references
[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]"The Drosophila snr1 and brm proteins are related to yeast SWI/SNF proteins and are components of a large protein complex."
Dingwall A.K., Beek S.J., McCallum C.M., Tamkun J.W., Kalpana G.V., Goff S.P., Scott M.P.
Mol. Biol. Cell 6:777-791(1995) [PubMed: 7579694] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[4]Dingwall A.K.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL47972.1.
+Additional computationally mapped references.

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Cross-references

Sequence databases

U28485 mRNA. Translation: AAC77830.1.
AE014297 Genomic DNA. Translation: AAF52024.1.
AY070501 mRNA. Translation: AAL47972.1.
RefSeqNP_730935.1.
UniGeneDm.4358

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ24090.

Genome annotation databases

GeneID40657.
KEGGdme:Dmel_CG1064.
NMPDRfig|7227.3.peg.11198.

Organism-specific databases

FlyBaseFBgn0011715. Snr1.

Phylogenomic databases

HOGENOMQ24090.

Gene expression databases

ArrayExpressQ24090.

Family and domain databases

InterProIPR006939. SNF5.
IPR017393. SWI_SNF_chromatin_remodel_cplx.
[Graphical view]
PANTHERPTHR10019. SNF5. 1 hit.
PfamPF04855. SNF5. 1 hit.
[Graphical view]
PIRSFPIRSF038126. SWI_SNF. 1 hit.

Other Resources

NextBio819884.

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Entry information

Entry nameQ24090_DROME
AccessionPrimary (citable) accession number: Q24090
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 1, 1999
Last modified: November 4, 2008
This is version 60 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information