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Unreviewed, UniProtKB/TrEMBL Q1J0L9 (Q1J0L9_DEIGD)

Last modified October 14, 2008. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Metal dependent phosphohydrolase, HD-GYP and PAS/PAC sensor EMBL ABF44965.1
Gene names
Ordered Locus Names: Dgeo_0663
OrganismDeinococcus geothermalis (strain DSM 11300) [Complete proteome] [HAMAP]
Taxonomic identifier319795 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

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Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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Ontologies

Keywords

   DomainSignal
   Molecular functionHydrolase Spearmint SPM006674
   Technical termComplete proteome

Gene Ontology (GO)

   Biological processregulation of transcription, DNA-dependent

Inferred from electronic annotation. Source: InterPro

signal transduction

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

signal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ABF44965.1
Chain22 – 384363 Potential EMBL ABF44965.1
PRO_5000120475

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Sequences

Sequence LengthMass (Da)Tools
Q1J0L9-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: D66F66813E8AECB6

FASTA38442,147
        10         20         30         40         50         60 
MTQKALNFCL CLSAPASVHV SFLPIAGGRV FEDLDFFDDP LPPLPGRSLL RPETTPPPPP 

        70         80         90        100        110        120 
QLRQLLLDAQ PAALFLLDGA GLIREVGGAW EAITGLSAEQ ACGQALLRWL RYDRVRHPRF 

       130        140        150        160        170        180 
LRAEQGVLEE VTLVSPRATR VVRLSWAIRG EYVVGSLEPL APSAQHAFRT AERLHDAERA 

       190        200        210        220        230        240 
LDEVVQLLGV SQDAWQAGHV RRIVDLAQRL AVVAGLGPAE VRAVRWGAAL HDIGKARVPQ 

       250        260        270        280        290        300 
AILQKPGPLD PEEFAVIQQH PVWGVSLLAD LTFLPVEVLD AIRHHHERWN GTGYPLGLAG 

       310        320        330        340        350        360 
QRIPLSARIV SIADVFDALL SNRPYKAAWT YQDAVDYLIA EAGRRFDPHL TRLFVCEVLG 

       370        380 
FTYLADRFPD DCGPVPGRGL GPAT

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References

[1]"Complete sequence of chromosome 1 of Deinococcus geothermalis DSM 11300."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Daly M.J., Fredrickson J.K., Makarova K.S., Gaidamakova E.K., Zhai M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000359 Genomic DNA. Translation: ABF44965.1.
RefSeqYP_604134.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4057628.
GenomeReviewsGene locus Dgeo_0663 in contig CP000359_GR.
KEGGdge:Dgeo_0663.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1J0L9.

Enzyme and pathway databases

BioCycDGEO319795:DGEO_0663-MON.

Family and domain databases

InterProIPR003607. Met-dep_phosphohydro_HD.
IPR006674. Met-dep_phosphohydro_HD_sub.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR006675. Unchar_HDIG.
[Graphical view]
PfamPF01966. HD. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
TIGRFAMsTIGR00277. HDIG. 1 hit.

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Entry information

Entry nameQ1J0L9_DEIGD
AccessionPrimary (citable) accession number: Q1J0L9
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: October 14, 2008
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information