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Unreviewed, UniProtKB/TrEMBL Q1IVB0 (Q1IVB0_ACIBL)

Last modified July 22, 2008. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Diguanylate cyclase with GAF sensor EMBL ABF39190.1
Gene names
Ordered Locus Names: Acid345_0185
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length1125 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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Ontologies

Keywords

   DomainSignal
   Technical termComplete proteome

Gene Ontology (GO)

   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ABF39190.1
Chain26 – 11251100 Potential EMBL ABF39190.1
PRO_5000120816

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Sequences

Sequence LengthMass (Da)Tools
Q1IVB0-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 1EA749ABED1B4752

FASTA1,125125,337
        10         20         30         40         50         60 
MEPLLAGTVF VPGLVALAFL LVFAYLQRQS SERYFHSWQW FWFANTAYYA LVAVADTHPK 

        70         80         90        100        110        120 
IPAYASLAHT AEICGAVALF VSARSFAKTE PPAWTKYLVL CALIYWTALH AIPPLRVMVR 

       130        140        150        160        170        180 
PYLHAWIAVL VVLLLATMEY ARVAYQRDSA GLRWMTASTA LWIVMQAGKE IPPSLLVGRY 

       190        200        210        220        230        240 
LHRGSEYLEI MPLLLLGTAM VVVLFDDERR AIQENALAFS SLDIDPTTPV TREQIQPSIE 

       250        260        270        280        290        300 
SLLTRFMSLL RLEQAVLYVS EPWRGSVPSV ARGFSPDFIT RLEVQNAGDY LADIAFRRGG 

       310        320        330        340        350        360 
ILSIHSLKEL QGPMRSAAHP GLTSLVNTLK EENISRFSAV CLQTRERNMG VVIFPHGKRH 

       370        380        390        400        410        420 
AFSASRLRLL LSVSMQMGMT LENYLLVHDA HRRTKEFELL TQIGQVISSR LDPDEVLAAV 

       430        440        450        460        470        480 
HRELGRLFDT SNFYVAFLEG LELRYEFETV GAIRQPRRSR RSKNGLSDFV IRTGQPILIR 

       490        500        510        520        530        540 
SDMKRVSQRL GIEPSSHPAK CFIGVPIRIG AVSVGVVAAL NFDREFVYEQ RDVEVLATAA 

       550        560        570        580        590        600 
GQVAVAIENA RMFAHEQRRA RYLSFLNNVS QTAISSQNAE EMLSEIVGQI QKNFNYDHIG 

       610        620        630        640        650        660 
IGILDYATKE IEIKAEAGTT AHAKGKRVAL GVGVLGRVAR TGDTSLVQDT AATHLAGILP 

       670        680        690        700        710        720 
DSRSALCIPI TYAEQLLGVL NIESRRENAF TEEDTLLLRT LADLLATALH NAFVFQKMQQ 

       730        740        750        760        770        780 
QSITDALTGS KTRRYFLEAL QSEWKRASRS TRPFSVVMID LDKFKQVNDT MGHLEGDLVL 

       790        800        810        820        830        840 
ARIARLLEQK CRQSNVVARF GGDEFVILMP ETGVDQAQIL AERLRLWIAT DPMLSEHQIT 

       850        860        870        880        890        900 
GSFGVATYPI HGSSVEDIMR VADAGMYVSK HAGGNKVATA DEFIDGQNTS VQRQLISAYV 

       910        920        930        940        950        960 
EGFLQREHYG PEYTSELVSA LKKFSENEAE GKREVMMDAI LALNRASESR ELFASGHGEQ 

       970        980        990       1000       1010       1020 
VARTAEIIAR ELGIGGQDIQ DLIFAARIHD VGKIVVPEKI LNKPAMLTED EHYLVAMHAN 

      1030       1040       1050       1060       1070       1080 
VGAEIIDAIP DAQHIRQMVR HHHEAFDGSG YPDGLKGEQI PLYARIISVA EAYVSMMVDR 

      1090       1100       1110       1120 
SYRAARSQAD AVRELESRSG SQFDGMLVRI LIRQFKAERA AQGND

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF39190.1.
RefSeqYP_589264.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4073072.
GenomeReviewsGene locus Acid345_0185 in contig CP000360_GR.
KEGGaba:Acid345_0185.
NMPDRfig|204669.6.peg.184.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IVB0.

Family and domain databases

InterProIPR003018. GAF.
IPR000160. GGDEF.
IPR003607. Met-dep_phosphohydro_HD.
IPR006674. Met-dep_phosphohydro_HD_sub.
[Graphical view]
PfamPF01590. GAF. 2 hits.
PF00990. GGDEF. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTSM00267. DUF1. 1 hit.
SM00065. GAF. 3 hits.
SM00471. HDc. 1 hit.
[Graphical view]
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IVB0_ACIBL
AccessionPrimary (citable) accession number: Q1IVB0
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information