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Unreviewed, UniProtKB/TrEMBL Q1IT62 (Q1IT62_ACIBL)

Last modified November 4, 2008. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesRecommended name:
    Sensor protein RuleBase RU000720V2
    EC=2.7.13.3
Gene names
Ordered Locus Names: Acid345_0935
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length828 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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General annotation (Comments)

Catalytic activity

ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. Spearmint SPM004358

Sequence similarities

Contains 1 histidine kinase domain. RuleBase RU000720V2 Spearmint SPM004358

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ABF39938.1
Chain24 – 828805 Potential EMBL ABF39938.1
PRO_5000121057

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Sequences

Sequence LengthMass (Da)Tools
Q1IT62-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: C9164FB3EAB8584E

FASTA82891,315
        10         20         30         40         50         60 
MSRFRKLAWA ASAIVIAHLI WLAVWPNARW GFLASQQFQF LAGVLAGIAC WRASERSQQY 

        70         80         90        100        110        120 
PRMFWQFSAV TFGFWSIASL IDSSYDLLGN GLIDPPLWVA LVIFLSTAPM FIAALMGGGK 

       130        140        150        160        170        180 
SEERVHWDVI LDVAQLLILI VAVHIMLVAI PSMTQSVERG AVHRLILLAA WRGALALALT 

       190        200        210        220        230        240 
MRAAFSKSLA IRRLLAPVAA AMSLFAVASS VGNFADRFQI WNEVRWFDLA WTIPFALVAV 

       250        260        270        280        290        300 
AASLWRERGR VGVQSELTAD SAPVFIIYLP ALAIPVILLS LYSTIVFEQV VVGLTAMFVS 

       310        320        330        340        350        360 
VAFFTMRVLV AQRRQDQMLQ QLANSERRYR RLFEDNMAAV YRSTPDGQIT DCNQAFCDMF 

       370        380        390        400        410        420 
GYTKEEIANG SAARLYAGGK VEREATLRDL RTHGQQRSVQ VAYRRKDGSL IHTLGHRAMV 

       430        440        450        460        470        480 
VDRDGMEMIE GTLIDMTQRR SLELQLQQSQ KMESLGTMAG GVAHDFNNLL TVIGGYSAMQ 

       490        500        510        520        530        540 
MANLDANDPN HEYATEIKAA SDRAAGLTRQ LLAFSRQQVM EERPVILNSL IRDFEKFLRR 

       550        560        570        580        590        600 
LVGEDVQLRT SFDLELGTVR TDPGQMEQVL MNLTSNARDA MPLGGTIRIE TANVVLNERS 

       610        620        630        640        650        660 
LERNPIVVPG GYARLSVSDD GIGMEEATIA HIFEPFFTTK AVGKGTGLGL ATTYGIVKQS 

       670        680        690        700        710        720 
RGYIEVQSSP GAGSRFDVYL PLIGRDGAGK SGDTRTAVAR GTETILLVED DVQLRSMSVT 

       730        740        750        760        770        780 
LLQSCGYNVL TADDPREIEK LCERHGERID LLLTDVVMPH LSGSEVAKRV AAKVPAIKIL 

       790        800        810        820 
FMSGYPTHSK LDRTALEASG SFLQKPFAPA VLAAKVREVL DQELTGQA

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF39938.1.
RefSeqYP_590012.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4070587.
GenomeReviewsGene locus Acid345_0935 in contig CP000360_GR.
KEGGaba:Acid345_0935.
NMPDRfig|204669.6.peg.921.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IT62.

Family and domain databases

InterProIPR003594. ATP_bd_ATPase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR004358. Sig_transdc_His_kin-like_C.
IPR003661. Sig_transdc_His_kin_sub1_dim/P.
IPR005467. Sig_transdc_His_kinase_core.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
PfamPF02518. HATPase_c. 1 hit.
PF00512. HisKA. 1 hit.
PF00989. PAS. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSPR00344. BCTRLSENSOR.
ProDomPD000039. Response_reg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00387. HATPase_c. 1 hit.
SM00388. HisKA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50109. HIS_KIN. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IT62_ACIBL
AccessionPrimary (citable) accession number: Q1IT62
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: November 4, 2008
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information