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Unreviewed, UniProtKB/TrEMBL Q1IRV5 (Q1IRV5_ACIBL)

Last modified November 4, 2008. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesRecommended name:
    Sensor protein RuleBase RU000720V2
    EC=2.7.13.3
Gene names
Ordered Locus Names: Acid345_1393
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length756 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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General annotation (Comments)

Catalytic activity

ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. Spearmint SPM004358

Subcellular location

Membrane; Multi-pass membrane proteinBy similarity. RuleBase RU003568V1

Sequence similarities

Contains 1 histidine kinase domain. RuleBase RU000720V2 RuleBase RU003568V1 Spearmint SPM003660

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4242 Potential EMBL ABF40395.1
Chain43 – 756714 Potential EMBL ABF40395.1
PRO_5000121157

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Sequences

Sequence LengthMass (Da)Tools
Q1IRV5-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: B815C22920FB9588

FASTA75683,951
        10         20         30         40         50         60 
MAAPEPIRPP DTRRKRTIIA IVLAVLIFVL FTIIFSQAAF NLTFLHPDTS QQTLIFAALS 

        70         80         90        100        110        120 
ALIFLLFVAL VFVLLRNLVK LYFDSQSRVF GSRFRTKMVL GALGISLGPV IIMFIFAYGL 

       130        140        150        160        170        180 
MNRSIDRWFS KPIEEVRARA EGVASLLANY AIANANAEAL SIAEGVEVDK AYQTGNFSKV 

       190        200        210        220        230        240 
VEEMRRHEAT LQGGFSVALQ DDNAEAEFHA PQPWRQLRAQ TPGILAPQPP DHPHSIQIGQ 

       250        260        270        280        290        300 
RDFMVGVAPI GKNGRILVAI PLPANYSQQL KDIEFSQQQY WELHQQRKLI RRTYMGFLLL 

       310        320        330        340        350        360 
LTALVLFAST WVAFYLSKLV TRPLVALAEA TREMAMGRLD YRVDVAAQDE LGELVKSFNS 

       370        380        390        400        410        420 
MAAQMESSRE KIDASTRELA MANVEIEERR RYLETILETI PTGVLSLDAQ RHVTRVNTAF 

       430        440        450        460        470        480 
RRLARLSEGY TANPGTTLTD IFPEDVVHDL EHMLRRADRM GTTTSQMEVS TPRVQLNVAM 

       490        500        510        520        530        540 
TVSSLDPRPR NSAFRLGYVI VVEDLSDLLK AQKQAAWREV ARRVAHEIKN PLTPIALAAE 

       550        560        570        580        590        600 
RIRRHLDRGL QPDANSLAVI HSCSDTIASS VETLRNLVDQ FSALARFPAS QPQASDINEV 

       610        620        630        640        650        660 
VQSALLMFEG RLEGIRVTTF LAPDLPKVMA DPAAVKRAVA NLVDNAAEAL NSSMLREIQI 

       670        680        690        700        710        720 
ATNLTGSRDM VEIVVADTGH GVTSEVKEKL FLPYFSTKQR GTGLGLAIVS RIIEDHHGTI 

       730        740        750 
RVEENSPVGT RFIVELPVAP ESAIATAAEH AQHSDR

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF40395.1.
RefSeqYP_590469.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4068928.
GenomeReviewsGene locus Acid345_1393 in contig CP000360_GR.
KEGGaba:Acid345_1393.
NMPDRfig|204669.6.peg.1380.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IRV5.

Family and domain databases

InterProIPR003594. ATP_bd_ATPase.
IPR000014. PAS.
IPR013656. PAS_4.
IPR004358. Sig_transdc_His_kin-like_C.
IPR003661. Sig_transdc_His_kin_sub1_dim/P.
IPR005467. Sig_transdc_His_kinase_core.
IPR003660. Sig_transdc_His_kinase_HAMP.
IPR017232. Sig_transdc_His_kinase_NtrY.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
PfamPF00672. HAMP. 1 hit.
PF02518. HATPase_c. 1 hit.
PF00512. HisKA. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
PIRSFPIRSF037532. STHK_NtrY. 1 hit.
PRINTSPR00344. BCTRLSENSOR.
SMARTSM00304. HAMP. 1 hit.
SM00387. HATPase_c. 1 hit.
SM00388. HisKA. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50885. HAMP. 1 hit.
PS50109. HIS_KIN. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IRV5_ACIBL
AccessionPrimary (citable) accession number: Q1IRV5
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: November 4, 2008
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information