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Unreviewed, UniProtKB/TrEMBL Q1IRH2 (Q1IRH2_ACIBL)

Last modified July 22, 2008. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Methyl-accepting chemotaxis sensory transducer EMBL ABF40528.1
Gene names
Ordered Locus Names: Acid345_1526
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length858 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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Ontologies

Keywords

   DomainSignal
   Technical termComplete proteome

Gene Ontology (GO)

   Biological processchemotaxis

Inferred from electronic annotation. Source: InterPro

signal transduction

Inferred from electronic annotation. Source: InterPro

   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3535 Potential EMBL ABF40528.1
Chain36 – 858823 Potential EMBL ABF40528.1
PRO_5000121189

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Sequences

Sequence LengthMass (Da)Tools
Q1IRH2-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 88C3544F5036DAE4

FASTA85891,945
        10         20         30         40         50         60 
MRWFNDLTVA KKLMWSFSLM ALLAGVVGGV SVWQLTQSER ALSHMHNNDI KSIILLGKVI 

        70         80         90        100        110        120 
QNNYINQLRL RDLAKTTDRT TDATLRQAIA ETAKANSVLL EEYSRTEMEE DERGAYEDYK 

       130        140        150        160        170        180 
QSRLNFHETR SAFLAAKERG DNSETERLLQ KADEQQGYMT GKLGAIIESN NDSVTRVSTA 

       190        200        210        220        230        240 
NTANLKSARV EIGILLLIAV AAALMMGRMI GARIALALSQ VAAAAQRLAV GDVDVRVDIK 

       250        260        270        280        290        300 
TNDEPGLVAR AFGEMVSVIR ERAAQAEQIA RGNIEIEVKS LSEKDKLGNS YQAMLASLRT 

       310        320        330        340        350        360 
LVRESQKVAA ATKDGQLDVR AELGDTQGAY RALLTAQNEG LEVVAMPLKR SIEHLVKLSK 

       370        380        390        400        410        420 
GENGTQLNRP DYRGSYVELV AGFNGVFAAI DRLSQDTNTL VSAALDGKFD VRADASRHAG 

       430        440        450        460        470        480 
IYREVVEGVN RTLDAMIKPV QEGNRILFKM SVGNLSERVA IECRGDHERM KQAVNGLHDG 

       490        500        510        520        530        540 
LSGLMKVATA LANGEMSVDV KARSAEDEVS LPFVHMKENI LALQQEMNGI IQAADRGDLT 

       550        560        570        580        590        600 
YRADEAALHG AYAELLAGMN RVLEIVRSTM LQISKIAAPL KQSSDELSRI SREMEATSEQ 

       610        620        630        640        650        660 
TSAQANMASA GSEQVSKNVQ TVATGADEMG ASIREIAKST GEASKVATAA VQTADHTNAT 

       670        680        690        700        710        720 
IAKLGQSSAE IGEVIKVITS IAQQTNLLAL NATIEAARAG DAGKGFAVVA NEVKELAKET 

       730        740        750        760        770        780 
AKATEDISQK IVAIQGDTKG AVGAIGEIGA VIGQINDIQH GIASAVEEQS ATTSEISRNL 

       790        800        810        820        830        840 
AEAARGAVDI TANVTAVASA ARAATQGATE TGKSAQALQK MAVDLDAMIA RFKLSDDDVA 

       850 
SDRRFNLTRQ SSEYAGVM

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF40528.1.
RefSeqYP_590602.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4073014.
GenomeReviewsGene locus Acid345_1526 in contig CP000360_GR.
KEGGaba:Acid345_1526.
NMPDRfig|204669.6.peg.1515.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IRH2.

Family and domain databases

InterProIPR004089. Chemotax_Me-accpt_rcpt_sig.
IPR003660. Sig_transdc_His_kinase_HAMP.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 4 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IRH2_ACIBL
AccessionPrimary (citable) accession number: Q1IRH2
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information