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Unreviewed, UniProtKB/TrEMBL Q1IR27 (Q1IR27_ACIBL)

Last modified July 22, 2008. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Methyl-accepting chemotaxis sensory transducer EMBL ABF40673.1
Gene names
Ordered Locus Names: Acid345_1672
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length904 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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Ontologies

Keywords

   DomainSignal
   Technical termComplete proteome

Gene Ontology (GO)

   Biological processchemotaxis

Inferred from electronic annotation. Source: InterPro

signal transduction

Inferred from electronic annotation. Source: InterPro

   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3333 Potential EMBL ABF40673.1
Chain34 – 904871 Potential EMBL ABF40673.1
PRO_5000121225

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Sequences

Sequence LengthMass (Da)Tools
Q1IR27-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 82321AA6E72A28E2

FASTA90496,453
        10         20         30         40         50         60 
MNWFYNLKLS SKLLLSFLLV AGIAAIIGYV GLSSTNRVNS GSHEMYANAF VPVRELAASR 

        70         80         90        100        110        120 
GSFLDARIRS RSVLSVESRE ERRREYDSFK ADLQASNDHL SKYLATDLSP AEKPIATQLQ 

       130        140        150        160        170        180 
ALLAEYLQTT APALDLAMDG KDHDAEKVLN GRTRAAAAEA VDAYQKLVDI NVEIGEKREK 

       190        200        210        220        230        240 
ENSALAASAT QQIVGFMVFG VFAAIALGWF LTRLIVGPVR ELQATATKLA AGDVEVDIKA 

       250        260        270        280        290        300 
NTNDELGKLA QSIAALAATI KDRAQAAQHI AQGDLQLQIK PASDKDVLAK SLQSLVDTLN 

       310        320        330        340        350        360 
GLMQEMSTMS SAHDAGDIDA AINAAKFQGA YQMVASGINN MVAGHIVVKK KAMACLAEFG 

       370        380        390        400        410        420 
RGNFEAPLER FPGKKAFIND TIEQVRANLK SLIADTNTLS DAAIQGRLGT RADATRHQGD 

       430        440        450        460        470        480 
FRKIVQGVNY TLDTIVGKFD AIPKPIQFID SQFKVQYMNK AGLELMGKSA ESAIGSRCSY 

       490        500        510        520        530        540 
NTSACGTEKC TCAQAMKIDG LTRIETQARI QGKQYDFTCC AVPLKDGNGR TIGAFELMDD 

       550        560        570        580        590        600 
ESLIKTTMRK ADKVGDYRAR QAQKLSDALK ELAQGNLNAL MVTDASDADT DEARKTYEVI 

       610        620        630        640        650        660 
SDAFAKSAAA FRGAMMDIGR TTEALLEAAT MLNNVSQQMT ASADETATQA NVVSAASEQV 

       670        680        690        700        710        720 
SRNVQTVASG ADQMGASIKE IAKNTAEATR VANSAVQTAE ATNQNIGKLG QSSAEIGQVI 

       730        740        750        760        770        780 
KVITSIAQQT NLLALNATIE AARAGEAGKG FAVVANEVKE LAKETAKATE DIGRKIEAIQ 

       790        800        810        820        830        840 
TDTTGAVSAI AEIGAVINQI SDIQTTIASA VEEQSVTSNE ISRNLAEAAK GNVDITRNVT 

       850        860        870        880        890        900 
GVAEAARVTT TGAAETQKSA KSLERMAVEL KKLVSRFKYD GEQNSRSLAV SSRADRMPAT 


SMIQ

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF40673.1.
RefSeqYP_590747.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4069340.
GenomeReviewsGene locus Acid345_1672 in contig CP000360_GR.
KEGGaba:Acid345_1672.
NMPDRfig|204669.6.peg.1655.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IR27.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. Chemotax_Me-accpt_rcpt_sig.
IPR013656. PAS_4.
IPR003660. Sig_transdc_His_kinase_HAMP.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08448. PAS_4. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IR27_ACIBL
AccessionPrimary (citable) accession number: Q1IR27
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information