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Unreviewed, UniProtKB/TrEMBL Q1IR08 (Q1IR08_ACIBL)

Last modified July 22, 2008. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Two component transcriptional regulator, LuxR family EMBL ABF40692.1
Gene names
Ordered Locus Names: Acid345_1691
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length208 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted.

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General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707V5 Spearmint SPM000792

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Sequences

Sequence LengthMass (Da)Tools
Q1IR08-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 580070A06FF2C60F

FASTA20822,599
        10         20         30         40         50         60 
MKKKIPVLLA DDHALVRRGF RLMLEDDPEI EIVAEAGDGA QAVKLAGELH PRVVVMDCAM 

        70         80         90        100        110        120 
PGMSGMDATK QIRTQWPDIA VLMLTMHSED TWVRLALEAG ANGYILKSAI DLDLIQAVRR 

       130        140        150        160        170        180 
VANGETVLDP KVEKPTLKGN KSMGLTNREL EILQLIVSGK SNKEIASDLS LSVNTVSVHR 

       190        200 
ANIMEGLGIH NTAELVVYAI KNGLVTLS

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF40692.1.
RefSeqYP_590766.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4070474.
GenomeReviewsGene locus Acid345_1691 in contig CP000360_GR.
KEGGaba:Acid345_1691.
NMPDRfig|204669.6.peg.1674.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IR08.

Family and domain databases

InterProIPR000792. HTH_LuxR.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. Wing_hlx_DNA_bd.
[Graphical view]
Gene3DG3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
PfamPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
ProDomPD000307. HTH_LuxR. 1 hit.
PD000039. Response_reg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
PROSITEPS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IR08_ACIBL
AccessionPrimary (citable) accession number: Q1IR08
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information