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Unreviewed, UniProtKB/TrEMBL Q1IP01 (Q1IP01_ACIBL)

Last modified July 22, 2008. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Periplasmic sensor diguanylate phophodiesterase EMBL ABF41399.1
Gene names
Ordered Locus Names: Acid345_2398
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length506 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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Ontologies

Keywords

   DomainSignal
   Technical termComplete proteome

Gene Ontology (GO)

None. [Check GOA]

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ABF41399.1
Chain28 – 506479 Potential EMBL ABF41399.1
PRO_5000121428

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Sequences

Sequence LengthMass (Da)Tools
Q1IP01-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: F5D6C4231364CBE8

FASTA50656,465
        10         20         30         40         50         60 
MKKSPITPGS TALLVGLLVL LTSYLAMGSL ERSVARRELA LQAAMMLRGF QDGYQNARAD 

        70         80         90        100        110        120 
LAKLPSMEEM NCRDGISDTL ARLNFDNQYV RWYGIAQEGK VICRGPRVGV DLSDARFHRI 

       130        140        150        160        170        180 
DDEWFLISTE SPTKASNLLL AQKRGNLLYL AMLEPLLFDF MHEVDCKACV SFEFLVSAQP 

       190        200        210        220        230        240 
NVEMESAPAS GPSVIHYVVE KTRLNAQMKF TLNATQEYVD AFAFPGRVLS MTIAAAFGLV 

       250        260        270        280        290        300 
IGLSVYGNLT KYTSTAFLIE QGLKRNEFLP FYQPIIDSRD GSILGAEALV RWQPKGGNLI 

       310        320        330        340        350        360 
PPGQFIPFAE ENHLIDPITD QLEEKVLDDI KQFGWQDSSR FVSINAVAEQ ITDTPFCANL 

       370        380        390        400        410        420 
LRRLAEKRIP AKNFSVEITE RHQFPDLDRG RAALQSLVEA GIEIKLDDAG TGFGGFSYIQ 

       430        440        450        460        470        480 
ELPITTLKID KMFIDTLRQE KQDPKRAVLQ AIIEFAKTAN LHAIAEGVET KEQVSQLSAA 

       490        500 
GVFAIQGYVY SKPMPAEEFI RWMNAR

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF41399.1.
RefSeqYP_591473.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4071396.
GenomeReviewsGene locus Acid345_2398 in contig CP000360_GR.
KEGGaba:Acid345_2398.
NMPDRfig|204669.6.peg.2385.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IP01.

Family and domain databases

InterProIPR001633. EAL.
[Graphical view]
PfamPF00563. EAL. 1 hit.
[Graphical view]
SMARTSM00052. DUF2. 1 hit.
[Graphical view]
PROSITEPS50883. EAL. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IP01_ACIBL
AccessionPrimary (citable) accession number: Q1IP01
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information