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Unreviewed, UniProtKB/TrEMBL Q1IK70 (Q1IK70_ACIBL)

Last modified July 22, 2008. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Two component transcriptional regulator, LuxR family EMBL ABF42730.1
Gene names
Ordered Locus Names: Acid345_3729
OrganismAcidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

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Protein attributes

Sequence length209 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707V5

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Sequences

Sequence LengthMass (Da)Tools
Q1IK70-1 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 605E2C82DB242485

FASTA20922,757
        10         20         30         40         50         60 
MSDVGAAVVF VVDDDPQVRA SIQGLLKSAG LNSQCFESAE QFLQTKGPDG PSCLVVDVSL 

        70         80         90        100        110        120 
PGISGLDFQQ QLKEAGLSIP IVFITAHGDI PMTVRAMKSG ALEFLTKPFE PEHLLSVVEQ 

       130        140        150        160        170        180 
ALACDVARLA VEAEEAALRA RYEMLTRRER EVMGLVVSGF LNKQIASELG TSEITIKVHR 

       190        200 
GRVMLKMQAG SLAELVRMAE RLHLFRTIH

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References

[1]"Complete sequence of Acidobacteria bacterium Ellin345."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000360 Genomic DNA. Translation: ABF42730.1.
RefSeqYP_592804.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4069305.
GenomeReviewsGene locus Acid345_3729 in contig CP000360_GR.
KEGGaba:Acid345_3729.
NMPDRfig|204669.6.peg.3727.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ1IK70.

Family and domain databases

InterProIPR000792. HTH_LuxR.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
ProDomPD000307. HTH_LuxR. 1 hit.
PD000039. Response_reg. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
PROSITEPS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

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Entry information

Entry nameQ1IK70_ACIBL
AccessionPrimary (citable) accession number: Q1IK70
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: July 22, 2008
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information